RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	ACOX2	Q99424	681 aa		2.54	□□□□□ -2
VAPA-208	ENST00000584796	VGLL1	Q99990	258 aa		2.54	□□□□□ -2
VAPA-208	ENST00000584796	TMEM47	Q9BQJ4	181 aa		2.54	□□□□□ -2
VAPA-208	ENST00000584796	SPATC1L	Q9H0A9	340 aa		2.54	□□□□□ -2
VAPA-208	ENST00000584796	UPF3A	Q9H1J1	476 aa	Known RBP	2.54	□□□□□ -2
VAPA-208	ENST00000584796	LRMDA	Q9H2I8	198 aa		2.54	□□□□□ -2
VAPA-208	ENST00000584796	ZBTB20	Q9HC78	741 aa	Predicted RBP	2.54	□□□□□ -2
VAPA-208	ENST00000584796	TBC1D22B	Q9NU19	505 aa		2.54	□□□□□ -2
VAPA-208	ENST00000584796	BLOC1S4	Q9NUP1	217 aa		2.54	□□□□□ -2
VAPA-208	ENST00000584796	SLC13A4	Q9UKG4	626 aa		2.54	□□□□□ -2
VAPA-208	ENST00000584796	PYGO1	Q9Y3Y4	419 aa		2.54	□□□□□ -2
VAPA-208	ENST00000584796	JRKL	Q9Y4A0	524 aa		2.54	□□□□□ -2
VAPA-208	ENST00000584796	RIPK3	Q9Y572	518 aa		2.54	□□□□□ -2
VAPA-208	ENST00000584796	FANCI	Q9NVI1	1328 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796		A0A1W2PQM1	296 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	MEIOC	A2RUB1	952 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796		A6NL46	340 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	HS3ST1	O14792	307 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	SLC22A2	O15244	555 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	CLIC2	O15247	247 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	MBTPS2	O43462	519 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	TMCC2	O75069	709 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	SORBS2	O94875	1100 aa	Known RBP	2.53	□□□□□ -2
VAPA-208	ENST00000584796	NR3C1	P04150	777 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	MSH3	P20585	1137 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	GNAQ	P50148	359 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	TIMM10	P62072	90 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	CNTN2	Q02246	1040 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	MBTD1	Q05BQ5	628 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	FGFBP1	Q14512	234 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	ALG11	Q2TAA5	492 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	CAVIN4	Q5BKX8	364 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	HERC4	Q5GLZ8	1057 aa	Predicted RBP	2.53	□□□□□ -2
VAPA-208	ENST00000584796	NAA35	Q5VZE5	725 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	PAPD4	Q6PIY7	484 aa	Known RBP	2.53	□□□□□ -2
VAPA-208	ENST00000584796	PLXDC2	Q6UX71	529 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796		Q75L30	129 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	TBC1D1	Q86TI0	1168 aa	Predicted RBP	2.53	□□□□□ -2
VAPA-208	ENST00000584796	RPAIN	Q86UA6	219 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	P2RY8	Q86VZ1	359 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	CPO	Q8IVL8	374 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	OR8H2	Q8N162	312 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	AMER3	Q8N944	861 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	ANKRD52	Q8NB46	1076 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	FUZ	Q9BT04	418 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	CABLES2	Q9BTV7	478 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	MCRIP2	Q9BUT9	160 aa	Known RBP	2.53	□□□□□ -2
VAPA-208	ENST00000584796	BRF2	Q9HAW0	419 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	UBN1	Q9NPG3	1134 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	RPS10P5	Q9NQ39	176 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	WASH6P	Q9NQA3	447 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	PIH1D3	Q9NQM4	214 aa	Known RBP	2.53	□□□□□ -2
VAPA-208	ENST00000584796	CCDC177	Q9NQR7	707 aa	Predicted RBP	2.53	□□□□□ -2
VAPA-208	ENST00000584796	PPP1R14D	Q9NXH3	145 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	AATF	Q9NY61	560 aa	Known RBP eCLIP	2.53	□□□□□ -2
VAPA-208	ENST00000584796	MPP6	Q9NZW5	540 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	HMG20B	Q9P0W2	317 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	ZHX1	Q9UKY1	873 aa	Predicted RBP	2.53	□□□□□ -2
VAPA-208	ENST00000584796	MRPS28	Q9Y2Q9	187 aa	Known RBP	2.53	□□□□□ -2
VAPA-208	ENST00000584796	AAR2	Q9Y312	384 aa	Known RBP	2.53	□□□□□ -2
VAPA-208	ENST00000584796	LAMA4	Q16363	1823 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	KALRN	O60229	2985 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	SPAG17	Q6Q759	2223 aa		2.53	□□□□□ -2
VAPA-208	ENST00000584796	PTPN13	Q12923	2485 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	KIF26A	Q9ULI4	1882 aa	Predicted RBP	2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	KIF16B	Q96L93	1317 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	USP9X	Q93008	2570 aa	Predicted RBP	2.52	□□□□□ -2.01
VAPA-208	ENST00000584796		A0A0G2JNG1	304 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	DUXA	A6NLW8	204 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	ANKRD66	B4E2M5	251 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796		F5H0A9	414 aa	Predicted RBP	2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	TMEM178B	H3BS89	294 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	PI15	O43692	258 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	WISP2	O76076	250 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	ZFAND5	O76080	213 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	RPN1	P04843	607 aa	Known RBP	2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	ASNS	P08243	561 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	XBP1	P17861	261 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	DNAJB1	P25685	340 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	CALR	P27797	417 aa	Known RBP	2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	NBL1	P41271	181 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	CLNS1A	P54105	237 aa	Known RBP	2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	MAD2L1	Q13257	205 aa	Predicted RBP	2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	ITGA7	Q13683	1181 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	CAMK1	Q14012	370 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	DRAP1	Q14919	205 aa	Predicted RBP	2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	KIR2DS5	Q14953	304 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	KRTAP13-3	Q3SY46	172 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	ALDH1L2	Q3SY69	923 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	SLC9B1	Q4ZJI4	515 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	LCN10	Q6JVE6	187 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	MFSD6	Q6ZSS7	791 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	ADGRD2	Q7Z7M1	963 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	LONP2	Q86WA8	852 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	DZIP1	Q86YF9	867 aa	Known RBP	2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	ESX1	Q8N693	406 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	FAM133A	Q8N9E0	248 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	PCYOX1L	Q8NBM8	494 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	VN1R2	Q8NFZ6	395 aa		2.52	□□□□□ -2.01
VAPA-208	ENST00000584796	KLHL29	Q96CT2	875 aa		2.52	□□□□□ -2.01

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