RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 UNC5DQ6UXZ4 953 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 NAPRTQ6XQN6 538 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 BIVMQ86UB2 503 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 LRRC6Q86X45 466 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 DCUN1D3Q8IWE4 304 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 LRRC8AQ8IWT6 810 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 ENDOVQ8N8Q3 282 aaKnown RBP10.71□□□□□ -0.69
CCDC47-206ENST00000584112 ST6GALNAC3Q8NDV1 305 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 CHDHQ8NE62 594 aaPredicted RBP10.71□□□□□ -0.69
CCDC47-206ENST00000584112 SLC22A18Q96BI1 424 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 C14orf79Q96F83 325 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 OR2A14Q96R47 310 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 NRTNQ99748 197 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 DHRS4Q9BTZ2 278 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 KLHL25Q9H0H3 589 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 CXXC4Q9H2H0 198 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 MRM3Q9HC36 420 aaKnown RBP10.71□□□□□ -0.69
CCDC47-206ENST00000584112 ACSS2Q9NR19 701 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 CHRAC1Q9NRG0 131 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 GNPTGQ9UJJ9 305 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 ADAM21Q9UKJ8 722 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 TCFL5Q9UL49 500 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 G3BP2Q9UN86 482 aaKnown RBP10.71□□□□□ -0.69
CCDC47-206ENST00000584112 PADI2Q9Y2J8 665 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 ZNF451Q9Y4E5 1061 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 MRFAP1Q9Y605 127 aa10.71□□□□□ -0.69
CCDC47-206ENST00000584112 MEGF8Q7Z7M0 2845 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 CEP104O60308 925 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 GPC4O75487 556 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 NDUFS3O75489 264 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 SLCO2B1O94956 709 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 CD63P08962 238 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 TPSB2P20231 275 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 AOAHP28039 575 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 PCSK6P29122 969 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 PKLRP30613 574 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 CCR7P32248 378 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 SARNPP82979 210 aaKnown RBP10.7□□□□□ -0.7
CCDC47-206ENST00000584112 SEMA3AQ14563 771 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 NCF4Q15080 339 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 TPSAB1Q15661 275 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 KYNUQ16719 465 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 ARMC3Q5W041 872 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 TLDC1Q6P9B6 456 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 TTC23LQ6PF05 361 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 FAM198BQ6UWH4 519 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 TRIM73Q86UV7 250 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 OTUD6BQ8N6M0 293 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 PROKR1Q8TCW9 393 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 ADAMTS17Q8TE56 1095 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 CHTF18Q8WVB6 975 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 RAB11FIP5Q9BXF6 653 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 FAM60AQ9NP50 221 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 TREX1Q9NSU2 369 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 INTS7Q9NVH2 962 aaKnown RBP10.7□□□□□ -0.7
CCDC47-206ENST00000584112 SPHK1Q9NYA1 384 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 PLAGL1Q9UM63 463 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 CDYLQ9Y232 598 aa10.7□□□□□ -0.7
CCDC47-206ENST00000584112 ARGFXA6NJG6 315 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 IQCF5A8MTL0 148 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 RNF212BA8MTL3 300 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 ZSCAN9O15535 394 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-206ENST00000584112 KCNAB3O43448 404 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 TMEM63AO94886 807 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 FKBP9O95302 570 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 SIX3O95343 332 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-206ENST00000584112 S1PR4O95977 384 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 CAPN1P07384 714 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 TPBGLP0DKB5 382 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 CD9P21926 228 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 RPS3P23396 243 aaKnown RBP eCLIP10.69□□□□□ -0.7
CCDC47-206ENST00000584112 NMBRP28336 390 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 KIR3DL1P43629 444 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 KCNJ1P48048 391 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 RRADP55042 308 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 CRADDP78560 199 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 PTCHD3Q3KNS1 767 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 RNF187Q5TA31 235 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-206ENST00000584112 LCN10Q6JVE6 187 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 MRNIPQ6NTE8 343 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 RHBDD2Q6NTF9 364 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 LRRC8BQ6P9F7 803 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 MED25Q71SY5 747 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 OTOAQ7RTW8 1153 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 SDCCAG8Q86SQ7 713 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-206ENST00000584112 LDB1Q86U70 411 aaPredicted RBP10.69□□□□□ -0.7
CCDC47-206ENST00000584112 RAB43Q86YS6 212 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 VRK3Q8IV63 474 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 KRT222Q8N1A0 295 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 RAB42Q8N4Z0 105 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 CFAP61Q8NHU2 1237 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 FLVCR1-AS1Q8TAF5 88 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 LKAAEAR1Q8TD35 194 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 DENND1AQ8TEH3 1009 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 FOPNLQ96NB1 174 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 IP6K3Q96PC2 410 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 KIFC1Q9BW19 673 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 ING2Q9H160 280 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 P2RY12Q9H244 342 aa10.69□□□□□ -0.7
CCDC47-206ENST00000584112 TXLNGQ9NUQ3 528 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms