RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 EPHA6Q9UF33 1036 aa13.53□□□□□ -0.24
GGA3-216ENST00000583282 SH2B3Q9UQQ2 575 aa13.53□□□□□ -0.24
GGA3-216ENST00000583282 LOXL2Q9Y4K0 774 aa13.53□□□□□ -0.24
GGA3-216ENST00000583282 PCDHB11Q9Y5F2 797 aa13.53□□□□□ -0.24
GGA3-216ENST00000583282 SPEGQ15772 3267 aa13.53□□□□□ -0.24
GGA3-216ENST00000583282 SLC9B1P1A6NJY1 282 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 SYCE1LA8MT33 242 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 COPEO14579 308 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 NRP2O60462 931 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 PRAMEF10O60809 474 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 SPAG7O75391 227 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 WDR47O94967 919 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 COL6A2P12110 1019 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 ITIH1P19827 911 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 CSTF2P33240 577 aaKnown RBP eCLIP13.52□□□□□ -0.25
GGA3-216ENST00000583282 KCNC1P48547 511 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 ARL4DP49703 201 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 AGTR2P50052 363 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 YBX1P67809 324 aaKnown RBP13.52□□□□□ -0.25
GGA3-216ENST00000583282 CDKL1Q00532 357 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 ZFP36L1Q07352 338 aaKnown RBP13.52□□□□□ -0.25
GGA3-216ENST00000583282 SLC5A12Q1EHB4 618 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 DEFB110Q30KQ9 67 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 PTCHD3Q3KNS1 767 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 KIAA1614Q5VZ46 1190 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 CAPN13Q6MZZ7 669 aaPredicted RBP13.52□□□□□ -0.25
GGA3-216ENST00000583282 CDHR3Q6ZTQ4 885 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 ADCK2Q7Z695 626 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 LRRC56Q8IYG6 542 aaPredicted RBP13.52□□□□□ -0.25
GGA3-216ENST00000583282 FBXO39Q8N4B4 442 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 OR2L3Q8NG85 312 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 SLC22A18Q96BI1 424 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 RHBDF1Q96CC6 855 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 APOPT1Q96IL0 206 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 SCNM1Q9BWG6 230 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 C12orf65Q9H3J6 166 aaKnown RBP13.52□□□□□ -0.25
GGA3-216ENST00000583282 ZNF768Q9H5H4 540 aaKnown RBP13.52□□□□□ -0.25
GGA3-216ENST00000583282 SLC6A20Q9NP91 592 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 TMEM216Q9P0N5 145 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 PISDQ9UG56 409 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 SATB2Q9UPW6 733 aa13.52□□□□□ -0.25
GGA3-216ENST00000583282 CCDC187A0A096LP49 1063 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 GOLGA6L10A6NI86 522 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 EFCAB7A8K855 629 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 CCNT2O60583 730 aaKnown RBP13.51□□□□□ -0.25
GGA3-216ENST00000583282 CCNDBP1O95273 360 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 RBP1P09455 135 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 ANKRD34CP0C6C1 535 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 MYZAPP0CAP1 466 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 EBLN1P0CF75 366 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 CMPK1P30085 196 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 GDF5P43026 501 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 SH3BP2P78314 561 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 TRA2AQ13595 282 aaKnown RBP eCLIP13.51□□□□□ -0.25
GGA3-216ENST00000583282 PFKFB4Q16877 469 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 ZXDCQ2QGD7 858 aaPredicted RBP13.51□□□□□ -0.25
GGA3-216ENST00000583282 ICE2Q659A1 982 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 SULT1C3Q6IMI6 304 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 TMPRSS11BQ86T26 416 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 CNPY4Q8N129 248 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 TCAIMQ8N3R3 496 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 PTGR2Q8N8N7 351 aaPredicted RBP13.51□□□□□ -0.25
GGA3-216ENST00000583282 SNX31Q8N9S9 440 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 CCDC63Q8NA47 563 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 OR56A3Q8NH54 315 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 RHEBL1Q8TAI7 183 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 LIN37Q96GY3 246 aaPredicted RBP13.51□□□□□ -0.25
GGA3-216ENST00000583282 SMC6Q96SB8 1091 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 PITPNM3Q9BZ71 974 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 IQCGQ9H095 443 aaKnown RBP13.51□□□□□ -0.25
GGA3-216ENST00000583282 MRPL46Q9H2W6 279 aaKnown RBP13.51□□□□□ -0.25
GGA3-216ENST00000583282 MRPS30Q9NP92 439 aaKnown RBP13.51□□□□□ -0.25
GGA3-216ENST00000583282 C1GALT1Q9NS00 363 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 CUEDC1Q9NWM3 386 aaPredicted RBP13.51□□□□□ -0.25
GGA3-216ENST00000583282 AKAP7Q9P0M2 348 aaPredicted RBP13.51□□□□□ -0.25
GGA3-216ENST00000583282 ASB1Q9Y576 335 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 DCHS1Q96JQ0 3298 aa13.51□□□□□ -0.25
GGA3-216ENST00000583282 A0A1W2PNU3 283 aaPredicted RBP13.5□□□□□ -0.25
GGA3-216ENST00000583282 MED19A0JLT2 244 aaPredicted RBP13.5□□□□□ -0.25
GGA3-216ENST00000583282 LRRC14BA6NHZ5 514 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 HGSO14964 777 aaPredicted RBP13.5□□□□□ -0.25
GGA3-216ENST00000583282 TAPBPO15533 448 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 PRICKLE3O43900 615 aaPredicted RBP13.5□□□□□ -0.25
GGA3-216ENST00000583282 SMIM24O75264 130 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 ZBTB11O95625 1053 aaPredicted RBP13.5□□□□□ -0.25
GGA3-216ENST00000583282 ADRB1P08588 477 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 JMJD7P0C870 316 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 CDH1P12830 882 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 MTHFD2P13995 350 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 CREB1P16220 341 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 HNMTP50135 292 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 MAPK10P53779 464 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 GABREP78334 506 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 FOXM1Q08050 763 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 COL9A2Q14055 689 aaPredicted RBP13.5□□□□□ -0.25
GGA3-216ENST00000583282 ZIC1Q15915 447 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 RAB11FIP2Q7L804 512 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 HDXQ7Z353 690 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 ARHGAP22Q7Z5H3 698 aa13.5□□□□□ -0.25
GGA3-216ENST00000583282 CROCCP2Q86T23 111 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms