RNA–Protein interactions for RNA: ENST00000582376.1

GGA3-212, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-212ENST00000582376 ATP6V1DQ9Y5K8 247 aa8.74□□□□□ -1.01
GGA3-212ENST00000582376 CHD3Q12873 2000 aaKnown RBP8.74□□□□□ -1.01
GGA3-212ENST00000582376 VPS13CQ709C8 3753 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 FITM1A5D6W6 292 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 DDX3XO00571 662 aaKnown RBP eCLIP8.73□□□□□ -1.01
GGA3-212ENST00000582376 TFECO14948 347 aaPredicted RBP8.73□□□□□ -1.01
GGA3-212ENST00000582376 SGTAO43765 313 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 CDC40O60508 579 aaKnown RBP eCLIP8.73□□□□□ -1.01
GGA3-212ENST00000582376 PRMT3O60678 531 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 NDST3O95803 873 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 RARAP10276 462 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 FBLP22087 321 aaKnown RBP8.73□□□□□ -1.01
GGA3-212ENST00000582376 PRLHRP49683 370 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 ST13P50502 369 aaKnown RBP8.73□□□□□ -1.01
GGA3-212ENST00000582376 OC90Q02509 493 aaPredicted RBP8.73□□□□□ -1.01
GGA3-212ENST00000582376 KRT81Q14533 505 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 KIR2DS3Q14952 304 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 PAFAH1B3Q15102 231 aaKnown RBP8.73□□□□□ -1.01
GGA3-212ENST00000582376 SLC25A35Q3KQZ1 300 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 NCBP2-AS2Q69YL0 99 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 H3F3CQ6NXT2 135 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 UNC5DQ6UXZ4 953 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 TMTC1Q8IUR5 882 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 ZNF398Q8TD17 642 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 IMP4Q96G21 291 aaKnown RBP8.73□□□□□ -1.01
GGA3-212ENST00000582376 DCUN1D1Q96GG9 259 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 AGPAT1Q99943 283 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 YIPF2Q9BWQ6 316 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 TRABDQ9H4I3 376 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 PLEKHF2Q9H8W4 249 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 ENAMQ9NRM1 1142 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 C14orf105Q9NVL8 296 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 ZDHHC9Q9Y397 364 aa8.73□□□□□ -1.01
GGA3-212ENST00000582376 PHF3Q92576 2039 aaKnown RBP8.72□□□□□ -1.01
GGA3-212ENST00000582376 HYKKA2RU49 373 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 GABRR3A8MPY1 467 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 KCNK1O00180 336 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 GAPDHSO14556 408 aaPredicted RBP8.72□□□□□ -1.01
GGA3-212ENST00000582376 NEURL1O76050 574 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 MED26O95402 600 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 RALBP11234 206 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 TCF4P15884 667 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 BMP7P18075 431 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 TFEBP19484 476 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 MX2P20592 715 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 PDHA2P29803 388 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 PEBP1P30086 187 aaKnown RBP8.72□□□□□ -1.01
GGA3-212ENST00000582376 GRIA3P42263 894 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 VSX2P58304 361 aaPredicted RBP8.72□□□□□ -1.01
GGA3-212ENST00000582376 AP1B1Q10567 949 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 ZBTB17Q13105 803 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 MMRN1Q13201 1228 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 DAZAP2Q15038 168 aaPredicted RBP8.72□□□□□ -1.01
GGA3-212ENST00000582376 BTBD16Q32M84 506 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 WASHC2DQ5SRD0 308 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 CCDC183Q5T5S1 534 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 TMEM205Q6UW68 189 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 CAPN12Q6ZSI9 719 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 CXorf67Q86X51 503 aaPredicted RBP8.72□□□□□ -1.01
GGA3-212ENST00000582376 CRLF3Q8IUI8 442 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 VWA5B2Q8N398 1253 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 CNTD1Q8N815 330 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 CCNYQ8ND76 341 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 OR5AR1Q8NGP9 310 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 ZNF285Q96NJ3 590 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 THAP2Q9H0W7 228 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 KCNK13Q9HB14 408 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 INTS7Q9NVH2 962 aaKnown RBP8.72□□□□□ -1.01
GGA3-212ENST00000582376 TRPC4Q9UBN4 977 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 POLG2Q9UHN1 485 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 TDRKHQ9Y2W6 561 aaKnown RBP8.72□□□□□ -1.01
GGA3-212ENST00000582376 PKP3Q9Y446 797 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 MXRA5Q9NR99 2828 aa8.72□□□□□ -1.01
GGA3-212ENST00000582376 SNRNP200O75643 2136 aaKnown RBP8.71□□□□□ -1.01
GGA3-212ENST00000582376 FFAR3O14843 346 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 GPR42O15529 346 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 PRPF4O43172 522 aaKnown RBP eCLIP8.71□□□□□ -1.02
GGA3-212ENST00000582376 BUD23O43709 281 aaKnown RBP8.71□□□□□ -1.02
GGA3-212ENST00000582376 NME2P1O60361 137 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 SLC25A12O75746 678 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 SEC24DO94855 1032 aaPredicted RBP8.71□□□□□ -1.02
GGA3-212ENST00000582376 NME2P22392 152 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 UQCRC1P31930 480 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 RPA4Q13156 261 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 SLC14A2Q15849 920 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 TAZQ16635 292 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 EMC4Q5J8M3 183 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 CATSPEREQ5SY80 951 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 PLAG1Q6DJT9 500 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 PPP1R2P3Q6NXS1 205 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 ARHGAP11AQ6P4F7 1023 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 FIGLAQ6QHK4 219 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 GLT6D1Q7Z4J2 308 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 WDR53Q7Z5U6 358 aaPredicted RBP8.71□□□□□ -1.02
GGA3-212ENST00000582376 LIX1LQ8IVB5 337 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 LRRC75A-AS1Q8N1F1 130 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 POGLUT1Q8NBL1 392 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 TADA1Q96BN2 335 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 MENTQ9BUN1 341 aa8.71□□□□□ -1.02
GGA3-212ENST00000582376 LUC7LQ9NQ29 371 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms