RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 PPP1R14CQ8TAE6 165 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 DENND1AQ8TEH3 1009 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 UBTD2Q8WUN7 234 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 IL17FQ96PD4 163 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 PAIP2Q9BPZ3 127 aaKnown RBP13.81□□□□□ -0.2
SKA2-205ENST00000580541 RTKNQ9BST9 563 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 MENTQ9BUN1 341 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 ERVK-6Q9BXR3 956 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 DNAJC11Q9NVH1 559 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 OXSMQ9NWU1 459 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 ACTR10Q9NZ32 417 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 GPRC5BQ9NZH0 403 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 SLC17A7Q9P2U7 560 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 CIDEBQ9UHD4 219 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 EMCNQ9ULC0 261 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 STK38LQ9Y2H1 464 aa13.81□□□□□ -0.2
SKA2-205ENST00000580541 A8MT66 165 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 G3V2L1 256 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 H3BQF6 201 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 BTN3A3O00478 584 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 CLGNO14967 610 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 CAPN5O15484 640 aaPredicted RBP13.8□□□□□ -0.2
SKA2-205ENST00000580541 DLX3O60479 287 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 CCNT2O60583 730 aaKnown RBP13.8□□□□□ -0.2
SKA2-205ENST00000580541 WDR47O94967 919 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 EPB42P16452 691 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 GNAZP19086 355 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 PRDX3P30048 256 aaKnown RBP13.8□□□□□ -0.2
SKA2-205ENST00000580541 HSPA7P48741 367 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 ACADVLP49748 655 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 CCL7P80098 99 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 PRDX1Q06830 199 aaKnown RBP13.8□□□□□ -0.2
SKA2-205ENST00000580541 SLC5A12Q1EHB4 618 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 PERM1Q5SV97 790 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 PRAMEF13Q5VWM6 474 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 IRGCQ6NXR0 463 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 LCTLQ6UWM7 567 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 MBOAT1Q6ZNC8 495 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 USP53Q70EK8 1073 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 THOC6Q86W42 341 aaKnown RBP13.8□□□□□ -0.2
SKA2-205ENST00000580541 C17orf64Q86WR6 236 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 C2orf73Q8N5S3 287 aaPredicted RBP13.8□□□□□ -0.2
SKA2-205ENST00000580541 TBC1D19Q8N5T2 526 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 ANKRD42Q8N9B4 389 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 LMNTD1Q8N9Z9 388 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 DEFB124Q8NES8 71 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 OR4D9Q8NGE8 314 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 ZUFSPQ96AP4 578 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 MAGEB10Q96LZ2 347 aaPredicted RBP13.8□□□□□ -0.2
SKA2-205ENST00000580541 SGPP1Q9BX95 441 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 C1GALT1Q9NS00 363 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 SNX7Q9UNH6 387 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 SLC22A14Q9Y267 594 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 DNAH14Q0VDD8 3507 aa13.8□□□□□ -0.2
SKA2-205ENST00000580541 FRYLO94915 3013 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 TM4SF5O14894 197 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 TAPBPO15533 448 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 SNUPNO95149 360 aaKnown RBP13.79□□□□□ -0.2
SKA2-205ENST00000580541 MLYCDO95822 493 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 BPGMP07738 259 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 SBK3P0C264 359 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 NPPBP16860 134 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 NR1D1P20393 614 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 CDH3P22223 829 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 CXCR2P25025 360 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 EEF1DP29692 281 aaKnown RBP13.79□□□□□ -0.2
SKA2-205ENST00000580541 GRK3P35626 688 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 SERPINB5P36952 375 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 ETV4P43268 484 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 SLC6A12P48065 614 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 SERPINB4P48594 390 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 ARL4DP49703 201 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 TBPL1P62380 186 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 TRA2AQ13595 282 aaKnown RBP eCLIP13.79□□□□□ -0.2
SKA2-205ENST00000580541 FASTKQ14296 549 aaKnown RBP13.79□□□□□ -0.2
SKA2-205ENST00000580541 PDK4Q16654 411 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 NKAIN2Q5VXU1 208 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 SPESP1Q6UW49 350 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 SUSD1Q6UWL2 747 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 LRRC56Q8IYG6 542 aaPredicted RBP13.79□□□□□ -0.2
SKA2-205ENST00000580541 SNX31Q8N9S9 440 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 LINC01555Q8NAE3 123 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 PPFIBP2Q8ND30 876 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 DYDC1Q8WWB3 177 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 JPH3Q8WXH2 748 aaPredicted RBP13.79□□□□□ -0.2
SKA2-205ENST00000580541 ATP6V1E2Q96A05 226 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 GRAMD1AQ96CP6 724 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 L3HYPDHQ96EM0 354 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 CNDP1Q96KN2 507 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 TMEM74Q96NL1 305 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 C1QTNF3Q9BXJ4 246 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 SYNDIG1Q9H7V2 258 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 MRPS30Q9NP92 439 aaKnown RBP13.79□□□□□ -0.2
SKA2-205ENST00000580541 ABCF3Q9NUQ8 709 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 AKAP7Q9P0M2 348 aaPredicted RBP13.79□□□□□ -0.2
SKA2-205ENST00000580541 ANKMY1Q9P2S6 941 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 POMT2Q9UKY4 750 aa13.79□□□□□ -0.2
SKA2-205ENST00000580541 A0A0J9YY10 115 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 TLCD2A6NGC4 264 aa13.78□□□□□ -0.2
SKA2-205ENST00000580541 NTN3O00634 580 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms