RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 EBNA1BP2Q99848 306 aaKnown RBP19.34■□□□□ 0.69
SMG8-204ENST00000580498 SLC25A23Q9BV35 468 aa19.34■□□□□ 0.69
SMG8-204ENST00000580498 ING2Q9H160 280 aa19.34■□□□□ 0.69
SMG8-204ENST00000580498 MRPS30Q9NP92 439 aaKnown RBP19.34■□□□□ 0.69
SMG8-204ENST00000580498 TAS2R13Q9NYV9 303 aa19.34■□□□□ 0.69
SMG8-204ENST00000580498 TLK1Q9UKI8 766 aa19.34■□□□□ 0.69
SMG8-204ENST00000580498 DHRS7Q9Y394 339 aa19.34■□□□□ 0.69
SMG8-204ENST00000580498 SNRNP200O75643 2136 aaKnown RBP19.33■□□□□ 0.69
SMG8-204ENST00000580498 A0A1B0GX78 115 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 MYO1CO00159 1063 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 GABRA4P48169 554 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 CLCN7P51798 805 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 PGDP52209 483 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 ARL4CP56559 192 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 NFKB2Q00653 900 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 DHX9Q08211 1270 aaKnown RBP19.33■□□□□ 0.68
SMG8-204ENST00000580498 IL10RAQ13651 578 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 SSPNQ14714 243 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 THEMIS2Q5TEJ8 643 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 ASB18Q6ZVZ8 466 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 FAM20CQ8IXL6 584 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 BBOF1Q8ND07 529 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 OR2L3Q8NG85 312 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 PDLIM2Q96JY6 352 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 FER1L6-AS2Q96M78 137 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 GBP5Q96PP8 586 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 GPR21Q99679 349 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 TRIM56Q9BRZ2 755 aaKnown RBP19.33■□□□□ 0.68
SMG8-204ENST00000580498 DHCR7Q9UBM7 475 aaKnown RBP19.33■□□□□ 0.68
SMG8-204ENST00000580498 TP53TG5Q9Y2B4 290 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 PTRH2Q9Y3E5 179 aaKnown RBP19.33■□□□□ 0.68
SMG8-204ENST00000580498 PCDHGB7Q9Y5F8 929 aa19.33■□□□□ 0.68
SMG8-204ENST00000580498 ARHGEF33A8MVX0 844 aa19.32■□□□□ 0.68
SMG8-204ENST00000580498 ATXN8OSP0DMR3 200 aa19.32■□□□□ 0.68
SMG8-204ENST00000580498 ITGAXP20702 1163 aa19.32■□□□□ 0.68
SMG8-204ENST00000580498 OTX2P32243 289 aa19.32■□□□□ 0.68
SMG8-204ENST00000580498 GRIA3P42263 894 aa19.32■□□□□ 0.68
SMG8-204ENST00000580498 CSRP3P50461 194 aa19.32■□□□□ 0.68
SMG8-204ENST00000580498 CCL11P51671 97 aa19.32■□□□□ 0.68
SMG8-204ENST00000580498 PNLIPRP1P54315 467 aa19.32■□□□□ 0.68
SMG8-204ENST00000580498 HIF1AQ16665 826 aa19.32■□□□□ 0.68
SMG8-204ENST00000580498 TTLL10Q6ZVT0 673 aa19.32■□□□□ 0.68
SMG8-204ENST00000580498 HPS6Q86YV9 775 aa19.32■□□□□ 0.68
SMG8-204ENST00000580498 FBXO15Q8NCQ5 510 aaPredicted RBP19.32■□□□□ 0.68
SMG8-204ENST00000580498 FKBP10Q96AY3 582 aa19.32■□□□□ 0.68
SMG8-204ENST00000580498 SNF8Q96H20 258 aa19.32■□□□□ 0.68
SMG8-204ENST00000580498 AARSD1Q9BTE6 412 aaKnown RBP19.32■□□□□ 0.68
SMG8-204ENST00000580498 CUTCQ9NTM9 273 aa19.32■□□□□ 0.68
SMG8-204ENST00000580498 CORO1CQ9ULV4 474 aaPredicted RBP19.32■□□□□ 0.68
SMG8-204ENST00000580498 KLHL20Q9Y2M5 609 aa19.32■□□□□ 0.68
SMG8-204ENST00000580498 PCDHGA9Q9Y5G4 932 aaKnown RBP19.32■□□□□ 0.68
SMG8-204ENST00000580498 TLN1Q9Y490 2541 aaKnown RBP19.31■□□□□ 0.68
SMG8-204ENST00000580498 PCM1Q15154 2024 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 USP27XA6NNY8 438 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 DSCR3O14972 297 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 WISP1O95388 367 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 CASRP41180 1078 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 PTGIRP43119 386 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 ABATP80404 500 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 MPP1Q00013 466 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 CUL1Q13616 776 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 ZNF385CQ66K41 422 aaPredicted RBP19.31■□□□□ 0.68
SMG8-204ENST00000580498 LCN10Q6JVE6 187 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 UBE2R2Q712K3 238 aaPredicted RBP19.31■□□□□ 0.68
SMG8-204ENST00000580498 MYO1HQ8N1T3 1032 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 CLEC1AQ8NC01 280 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 C2CD4AQ8NCU7 369 aaPredicted RBP19.31■□□□□ 0.68
SMG8-204ENST00000580498 MCOLN3Q8TDD5 553 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 RERGQ96A58 199 aaPredicted RBP19.31■□□□□ 0.68
SMG8-204ENST00000580498 PTERQ96BW5 349 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 CERS2Q96G23 380 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 ZFYVE21Q9BQ24 234 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 ACAT2Q9BWD1 397 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 CLMPQ9H6B4 373 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 ZC3H7BQ9UGR2 993 aaKnown RBP19.31■□□□□ 0.68
SMG8-204ENST00000580498 NXT1Q9UKK6 140 aaKnown RBP19.31■□□□□ 0.68
SMG8-204ENST00000580498 ZNF451Q9Y4E5 1061 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 KLK4Q9Y5K2 254 aa19.31■□□□□ 0.68
SMG8-204ENST00000580498 A0A0J9YVX5 310 aa19.3■□□□□ 0.68
SMG8-204ENST00000580498 TXNDC9O14530 226 aa19.3■□□□□ 0.68
SMG8-204ENST00000580498 PRPF4O43172 522 aaKnown RBP eCLIP19.3■□□□□ 0.68
SMG8-204ENST00000580498 PRICKLE3O43900 615 aaPredicted RBP19.3■□□□□ 0.68
SMG8-204ENST00000580498 HAUS5O94927 633 aa19.3■□□□□ 0.68
SMG8-204ENST00000580498 ALBP02768 609 aa19.3■□□□□ 0.68
SMG8-204ENST00000580498 C8GP07360 202 aa19.3■□□□□ 0.68
SMG8-204ENST00000580498 HIST1H2AGP0C0S8 130 aaPredicted RBP19.3■□□□□ 0.68
SMG8-204ENST00000580498 HIST1H2ADP20671 130 aa19.3■□□□□ 0.68
SMG8-204ENST00000580498 PSMB5P28074 263 aa19.3■□□□□ 0.68
SMG8-204ENST00000580498 VSX2P58304 361 aaPredicted RBP19.3■□□□□ 0.68
SMG8-204ENST00000580498 ILF2Q12905 390 aaKnown RBP19.3■□□□□ 0.68
SMG8-204ENST00000580498 PDAP1Q13442 181 aaKnown RBP19.3■□□□□ 0.68
SMG8-204ENST00000580498 MUM1Q2TAK8 710 aa19.3■□□□□ 0.68
SMG8-204ENST00000580498 CCSMST1Q4G0I0 132 aa19.3■□□□□ 0.68
SMG8-204ENST00000580498 FCRL6Q6DN72 434 aa19.3■□□□□ 0.68
SMG8-204ENST00000580498 ADCK2Q7Z695 626 aa19.3■□□□□ 0.68
SMG8-204ENST00000580498 CREG2Q8IUH2 290 aa19.3■□□□□ 0.68
SMG8-204ENST00000580498 OR2A1Q8NGT9 310 aa19.3■□□□□ 0.68
SMG8-204ENST00000580498 OR2Y1Q8NGV0 311 aa19.3■□□□□ 0.68
SMG8-204ENST00000580498 NACC2Q96BF6 587 aa19.3■□□□□ 0.68
SMG8-204ENST00000580498 CFAP36Q96G28 342 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms