RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 NFKB2Q00653 900 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 TAP2Q03519 686 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 NAE1Q13564 534 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 SETDB1Q15047 1291 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 SF1Q15637 639 aaKnown RBP10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 PFKFB4Q16877 469 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 HHATQ5VTY9 493 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 PRAMEF13Q5VWM6 474 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 TMEM71Q6P5X7 295 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 LCTLQ6UWM7 567 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 RBM44Q6ZP01 1051 aaKnown RBP10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 TAX1BP1Q86VP1 789 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 PTGR2Q8N8N7 351 aaPredicted RBP10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 ARMC2Q8NEN0 867 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 DENND1AQ8TEH3 1009 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 PPP4R1Q8TF05 950 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 UBTD2Q8WUN7 234 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 JPH3Q8WXH2 748 aaPredicted RBP10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 RSC1A1Q92681 617 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 ZBTB9Q96C00 473 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 FAM111AQ96PZ2 611 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 SELENOSQ9BQE4 189 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 MENTQ9BUN1 341 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 ATG10Q9H0Y0 220 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 ACTR10Q9NZ32 417 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 AKAP7Q9P0M2 348 aaPredicted RBP10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 OPTCQ9UBM4 332 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 RALYQ9UKM9 306 aaKnown RBP10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 STK38LQ9Y2H1 464 aa10.9□□□□□ -0.66
CDK5RAP3-210ENST00000578733 ADAMTS20P59510 1910 aa10.9□□□□□ -0.67
CDK5RAP3-210ENST00000578733 MN1Q10571 1320 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TLCD2A6NGC4 264 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 BTN3A3O00478 584 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 CLGNO14967 610 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 CAPN5O15484 640 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 KLK8O60259 260 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 CCNT2O60583 730 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 KATNA1O75449 491 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 RASSF9O75901 435 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 WDR47O94967 919 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PROCP04070 461 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 FTH1P19P0C7X4 201 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 NEFHP12036 1026 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 CPA3P15088 417 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 CDH3P22223 829 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 HRH2P25021 359 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 CD1CP29017 333 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 GRK3P35626 688 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 GGT5P36269 586 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ARL4DP49703 201 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 CCL7P80098 99 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SIM1P81133 766 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TRA2AQ13595 282 aaKnown RBP eCLIP10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SLC5A12Q1EHB4 618 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TTMPQ5BVD1 217 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 NKAIN2Q5VXU1 208 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 CYB5D1Q6P9G0 228 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SPESP1Q6UW49 350 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ZYG11AQ6WRX3 759 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 MBOAT1Q6ZNC8 495 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 CDHR3Q6ZTQ4 885 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 C17orf64Q86WR6 236 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SPNS2Q8IVW8 549 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 KLHDC8AQ8IYD2 350 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ADGRF3Q8IZF5 1079 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TBC1D19Q8N5T2 526 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ARFGAP2Q8N6H7 521 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 KDF1Q8NAX2 398 aaPredicted RBP10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PPFIBP2Q8ND30 876 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ARL8AQ96BM9 186 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TMEM74Q96NL1 305 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TGM7Q96PF1 710 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 CD244Q9BZW8 370 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 C1GALT1Q9NS00 363 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ABCF3Q9NUQ8 709 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 DNAJC11Q9NVH1 559 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 GPRC5BQ9NZH0 403 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 COPG2Q9UBF2 871 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PTBP2Q9UKA9 531 aaKnown RBP10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 POMT2Q9UKY4 750 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 KCNE2Q9Y6J6 123 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 ZZEF1O43149 2961 aa10.89□□□□□ -0.67
CDK5RAP3-210ENST00000578733 A0A0J9YY10 115 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 TMEM120BA0PK00 339 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 A8MT66 165 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 D6RAR5 112 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 K7EPI3 171 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 GIPC1O14908 333 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 H2AFYO75367 372 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 KCNK5O95279 499 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 EPB42P16452 691 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 UGT2B7P16662 529 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 GNAZP19086 355 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 CXCR2P25025 360 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PRDX3P30048 256 aaKnown RBP10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 HPDP32754 393 aaPredicted RBP10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 SLC6A12P48065 614 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 KCNC1P48547 511 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 HSPA7P48741 367 aa10.88□□□□□ -0.67
CDK5RAP3-210ENST00000578733 PPP2R2AP63151 447 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms