RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-209	ENST00000578329	SYTL2	Q9HCH5	934 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ACSS2	Q9NR19	701 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RAB6B	Q9NRW1	208 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CUEDC1	Q9NWM3	386 aa	Predicted RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SERTAD3	Q9UJW9	196 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	AMFR	Q9UKV5	643 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	NOVA2	Q9UNW9	492 aa	Known RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PLCL2	Q9UPR0	1127 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DRG1	Q9Y295	367 aa	Known RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	B3GNT3	Q9Y2A9	372 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TDRKH	Q9Y2W6	561 aa	Known RBP	4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZNF451	Q9Y4E5	1061 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PCDHGB7	Q9Y5F8	929 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HEBP2	Q9Y5Z4	205 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MAU2	Q9Y6X3	613 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PKDREJ	Q9NTG1	2253 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MTOR	P42345	2549 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	F8	P00451	2351 aa		4.25	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CCDC168	Q8NDH2	2452 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SCN2A	Q99250	2005 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SCN3A	Q9NY46	2000 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329		A0A1B0GX78	115 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HEATR9	A2RTY3	570 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MIF4GD	A9UHW6	222 aa	Known RBP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ISM1	B1AKI9	464 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	C4orf51	C9J302	202 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CFAP99	D6REC4	459 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329		E7ENX8	843 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329		H0YGG7	62 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MYO1C	O00159	1063 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PRMT5	O14744	637 aa	Predicted RBP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DSCR3	O14972	297 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CD3EAP	O15446	510 aa	Known RBP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZNHIT1	O43257	154 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DPM1	O60762	260 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PSIP1	O75475	530 aa	Known RBP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	AGFG2	O95081	481 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TSPAN12	O95859	305 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	STATH	P02808	62 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	GSTM1	P09488	218 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	RALB	P11234	206 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	IVD	P26440	423 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ARL4D	P49703	201 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SESN2	P58004	480 aa	Predicted RBP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ARF3	P61204	181 aa	Predicted RBP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PDE1B	Q01064	536 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	GSTM4	Q03013	218 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TAP2	Q03519	686 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	KLC1	Q07866	573 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PRKAA1	Q13131	559 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PRPSAP1	Q14558	356 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PCOLCE	Q15113	449 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CCNG2	Q16589	344 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	HKDC1	Q2TB90	917 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MSS51	Q4VC12	460 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DNAJC21	Q5F1R6	531 aa	Known RBP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	WASHC2D	Q5SRD0	308 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FHL5	Q5TD97	284 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PRAMEF13	Q5VWM6	474 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ARMC6	Q6NXE6	501 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TLDC1	Q6P9B6	456 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DRICH1	Q6PGQ1	229 aa	Predicted RBP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SUSD1	Q6UWL2	747 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	UNC5D	Q6UXZ4	953 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FGD2	Q7Z6J4	655 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZNF227	Q86WZ6	799 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PDSS2	Q86YH6	399 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	TICAM1	Q8IUC6	712 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PLD3	Q8IV08	490 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	IGDCC3	Q8IVU1	814 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DCUN1D3	Q8IWE4	304 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	DENND6A	Q8IWF6	608 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZC3H7A	Q8IWR0	971 aa	Known RBP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PARP9	Q8IXQ6	854 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PPFIBP2	Q8ND30	876 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CFAP61	Q8NHU2	1237 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PRR7	Q8TB68	274 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	STT3B	Q8TCJ2	826 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	GRHL3	Q8TE85	626 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	ZNF480	Q8WV37	535 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PEX13	Q92968	403 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	FKBP10	Q96AY3	582 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PTER	Q96BW5	349 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MOCOS	Q96EN8	888 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MS4A14	Q96JA4	679 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SIGLEC10	Q96LC7	697 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	IMMP1L	Q96LU5	166 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PKP4	Q99569	1192 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MIPEP	Q99797	713 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	MACROD1	Q9BQ69	325 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SOX17	Q9H6I2	414 aa	Predicted RBP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	WDR54	Q9H977	334 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	EIF2B3	Q9NR50	452 aa	Known RBP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	CUTC	Q9NTM9	273 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	PLA2G3	Q9NZ20	509 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	C5AR2	Q9P296	337 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	IFT80	Q9P2H3	777 aa	Predicted RBP	4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	SLC17A6	Q9P2U8	582 aa		4.24	□□□□□ -1.73
PPP4R1-209	ENST00000578329	POLG2	Q9UHN1	485 aa		4.24	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms