RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 MRPL9Q9BYD2 267 aaKnown RBP2.32□□□□□ -2.04
COPS3-213ENST00000577210 ZMYND12Q9H0C1 365 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 COPS7BQ9H9Q2 264 aaPredicted RBP2.32□□□□□ -2.04
COPS3-213ENST00000577210 GSN-AS1Q9NRJ2 163 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 OR6C2Q9NZP2 312 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 DNAJB9Q9UBS3 223 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 LRWD1Q9UFC0 647 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 ISY1Q9ULR0 285 aaKnown RBP2.32□□□□□ -2.04
COPS3-213ENST00000577210 POMT1Q9Y6A1 747 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 IL16Q14005 1332 aa2.32□□□□□ -2.04
COPS3-213ENST00000577210 IGLV9-49A0A0B4J1Y8 123 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 HTR3EA5X5Y0 456 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 H0YAE9 185 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 TRIM77I1YAP6 450 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 STX6O43752 255 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 EDIL3O43854 480 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 SNX3O60493 162 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 SYNCRIPO60506 623 aaKnown RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 CIDEAO60543 219 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 GLRA3O75311 464 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 GOSR1O95249 250 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 CELF2O95319 508 aaKnown RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 TSHBP01222 138 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 VIMP08670 466 aaKnown RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 OR52Z1P0C646 297 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 IGHV4-31P0DP07 118 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 PRKAR1AP10644 381 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 HAPLN1P10915 354 aaPredicted RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 ACP2P11117 423 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 GP1BBP13224 206 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 ATP6V1B1P15313 513 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 PDGFRAP16234 1089 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 EPORP19235 508 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 CDH3P22223 829 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 CA4P22748 312 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 ACAT1P24752 427 aaKnown RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 AZGP1P25311 298 aaKnown RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 ATP5DP30049 168 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 CHRNB4P30926 498 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 HOXC13P31276 330 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 CEACAM8P31997 349 aaPredicted RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 PTGER4P35408 488 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 SOAT1P35610 550 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 MAGEA11P43364 429 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 RPL21P46778 160 aaKnown RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 NPY4RP50391 375 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 BMXP51813 675 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 CAPZA1P52907 286 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 KRTAP10-6P60371 365 aaPredicted RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 CDR2Q01850 454 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 YWHAHQ04917 246 aaPredicted RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 ACSM1Q08AH1 577 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 SGCGQ13326 291 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 ITGA9Q13797 1035 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 RRS1Q15050 365 aaKnown RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 E2F5Q15329 346 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 NPTX1Q15818 432 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 CDC37Q16543 378 aaPredicted RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 CDO1Q16878 200 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 ITPRIPL2Q3MIP1 535 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 CCDC92Q53HC0 331 aaPredicted RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 IYDQ6PHW0 289 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 TRIM65Q6PJ69 517 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 DZIP1Q86YF9 867 aaKnown RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 TMEM139Q8IV31 216 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 CCAR2Q8N163 923 aaKnown RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 NUP93Q8N1F7 819 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 RASGEF1AQ8N9B8 481 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 OR4K1Q8NGD4 311 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 FAM76AQ8TAV0 307 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 GRHL3Q8TE85 626 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 DYRK2Q92630 601 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 LGALS12Q96DT0 336 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 PGM2Q96G03 612 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 CCDC114Q96M63 670 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 MUS81Q96NY9 551 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 CPNE1Q99829 537 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 ASCL2Q99929 193 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 PSD2Q9BQI7 771 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 MGME1Q9BQP7 344 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 LAT2Q9GZY6 243 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 SDCBP2Q9H190 292 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 SDR39U1Q9NRG7 319 aaPredicted RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 INTS10Q9NVR2 710 aaKnown RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 OSER1Q9NX31 292 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 CHCHD3Q9NX63 227 aaKnown RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 PTTG2Q9NZH5 202 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 MTRRQ9UBK8 725 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 MTUS1Q9ULD2 1270 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 KCNJ14Q9UNX9 436 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 LIPGQ9Y5X9 500 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 ZFP37Q9Y6Q3 630 aaPredicted RBP2.31□□□□□ -2.04
COPS3-213ENST00000577210 PCDH11YQ9BZA8 1340 aa2.31□□□□□ -2.04
COPS3-213ENST00000577210 IFITM10A6NMD0 228 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 ENO4A6NNW6 628 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 DNM1LO00429 736 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 IFIT3O14879 490 aaKnown RBP2.3□□□□□ -2.04
COPS3-213ENST00000577210 CDK2AP2O75956 126 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 TOMM70O94826 608 aa2.3□□□□□ -2.04
COPS3-213ENST00000577210 AP2A2O94973 939 aa2.3□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms