RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	AGAP11	Q8TF27	550 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	ATP6V1E2	Q96A05	226 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	MOCOS	Q96EN8	888 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	OR4K3	Q96R72	315 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	GTPBP2	Q9BX10	602 aa	Known RBP	11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	NSRP1	Q9H0G5	558 aa	Known RBP	11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	EHD1	Q9H4M9	534 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	XKR8	Q9H6D3	395 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	MID1IP1	Q9NPA3	183 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	SLCO1B3	Q9NPD5	702 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	DYRK1B	Q9Y463	629 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	PCDHB11	Q9Y5F2	797 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	MUC3A	Q02505	3323 aa		11.51	□□□□□ -0.57
PRPF8-212	ENST00000575116	ADAMTS9	Q9P2N4	1935 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	PIPSL	A2A3N6	862 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	RHPN2P1	A8MT19	583 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	MATN2	O00339	956 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	UBFD1	O14562	309 aa	Known RBP	11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	ZW10	O43264	779 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	FOXD2	O60548	495 aa	Predicted RBP	11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	CCNDBP1	O95273	360 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	CLDN9	O95484	217 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	LMNA	P02545	664 aa	Known RBP	11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	ENO1	P06733	434 aa	Known RBP	11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	CHRM5	P08912	532 aa	Predicted RBP	11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	GLB1	P16278	677 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	EPOR	P19235	508 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	HRH2	P25021	359 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	CCR10	P46092	362 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	SEC24C	P53992	1094 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	ABAT	P80404	500 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	PRDX1	Q06830	199 aa	Known RBP	11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	SLC14A1	Q13336	389 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	NR1D2	Q14995	579 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	TBCC	Q15814	346 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	CCDC6	Q16204	474 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	INAVA	Q3KP66	663 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	GGTA1P	Q4G0N0	100 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	THEMIS2	Q5TEJ8	643 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	SUSD1	Q6UWL2	747 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	ATG14	Q6ZNE5	492 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	FAM47E	Q6ZV65	393 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	GPRIN3	Q6ZVF9	776 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	ZNF438	Q7Z4V0	828 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	CPLX4	Q7Z7G2	160 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	C17orf64	Q86WR6	236 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	GATAD2A	Q86YP4	633 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	WDR75	Q8IWA0	830 aa	Known RBP	11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	SFTPA2	Q8IWL1	248 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	SLC35F3	Q8IY50	421 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	CLYBL	Q8N0X4	340 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	AFAP1L2	Q8N4X5	818 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	LMNTD1	Q8N9Z9	388 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	KY	Q8NBH2	561 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	OR2A1	Q8NGT9	310 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	WDR34	Q96EX3	536 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	FAR2	Q96K12	515 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	SIKE1	Q9BRV8	207 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	EPB41L1	Q9H4G0	881 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	ZNF395	Q9H8N7	513 aa	Predicted RBP	11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	ACSS2	Q9NR19	701 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	FGFR1OP2	Q9NVK5	253 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	LRIT1	Q9P2V4	623 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	VTI1B	Q9UEU0	232 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	TRPS1	Q9UHF7	1281 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	ZDHHC2	Q9UIJ5	367 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	PADI4	Q9UM07	663 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	TRAF6	Q9Y4K3	522 aa		11.5	□□□□□ -0.57
PRPF8-212	ENST00000575116	LNP1	A1A4G5	178 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	OR6C74	A6NCV1	312 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	C2orf74	A8MZ97	194 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	BTN3A3	O00478	584 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	TRIM38	O00635	465 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	PPP6C	O00743	305 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	HGS	O14964	777 aa	Predicted RBP	11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	WFS1	O76024	890 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	C1GALT1C1L	P0DN25	315 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	TROVE2	P10155	538 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	UROS	P10746	265 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	HGF	P14210	728 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	TSPAN8	P19075	237 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	DRD4	P21917	467 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	HNF4A	P41235	474 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	DUSP3	P51452	185 aa	Predicted RBP	11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	ERVPABLB-1	P60509	514 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	CBX1	P83916	185 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	IRF8	Q02556	426 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	ZNF33B	Q06732	778 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	TRAF3	Q13114	568 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	LAPTM5	Q13571	262 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	TSTA3	Q13630	321 aa	Predicted RBP	11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	NAA25	Q14CX7	972 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	NR0B2	Q15466	257 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	CSRP2	Q16527	193 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	ATG9B	Q674R7	924 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	SLCO4C1	Q6ZQN7	724 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	EFL1	Q7Z2Z2	1120 aa	Known RBP	11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	SYVN1	Q86TM6	617 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	OOSP2	Q86WS3	158 aa		11.49	□□□□□ -0.57
PRPF8-212	ENST00000575116	ZNF781	Q8N8C0	355 aa		11.49	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms