RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 PMS2P1A4D2B8 440 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 KRT87PA6NCN2 255 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 TARM1B6A8C7 271 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 STMND1H3BQB6 276 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 PRICKLE3O43900 615 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 WISP3O95389 354 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 GUCA1CO95843 209 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 S100BP04271 92 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 SNRPAP09012 282 aaKnown RBP12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 LTA4HP09960 611 aaKnown RBP12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 EBLN1P0CF75 366 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 FGF5P12034 268 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 PVRP15151 417 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 HNMTP50135 292 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 ABATP80404 500 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 CDKL1Q00532 357 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 FASTKQ14296 549 aaKnown RBP12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 PHKG1Q16816 387 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 ZC3H12BQ5HYM0 836 aaKnown RBP12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 UBAP2Q5T6F2 1119 aaKnown RBP12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 CAPN13Q6MZZ7 669 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 FIGLAQ6QHK4 219 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 ADGRD1Q6QNK2 874 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 AGTRAPQ6RW13 159 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 SUSD1Q6UWL2 747 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 SBSNQ6UWP8 590 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 CMC1Q7Z7K0 106 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 TRIM73Q86UV7 250 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 PROSER1Q86XN7 944 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 OR2L3Q8NG85 312 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 FLVCR1-AS1Q8TAF5 88 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 STAG3L4Q8TBR4 150 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 DCAKDQ8WVC6 231 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 MED8Q96G25 268 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 CABS1Q96KC9 395 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 UBXN10Q96LJ8 280 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 CNTNAP3BQ96NU0 1288 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 MIPEPQ99797 713 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 CTRCQ99895 268 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 CNTNAP3Q9BZ76 1288 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 KLHL25Q9H0H3 589 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 ABCF3Q9NUQ8 709 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 ANKMY1Q9P2S6 941 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 PSMC3IPQ9P2W1 217 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 TAC3Q9UHF0 121 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 SERTAD3Q9UJW9 196 aa12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 URB1O60287 2271 aaKnown RBP12.3□□□□□ -0.44
TRAPPC1-206ENST00000573989 A0A096LPK6 155 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 A0A1W2PPV9 198 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 TMEM150CB9EJG8 249 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 C9orf172C9J069 976 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 CDC7O00311 574 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 C2P06681 752 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 SLC35E2BP0CK96 405 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 FOLR1P15328 257 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 CD1DP15813 335 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 MAGP20916 626 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 HRH2P25021 359 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 ATP1A2P50993 1020 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 PRDX1Q06830 199 aaKnown RBP12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 NAE1Q13564 534 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 KCNAB1Q14722 419 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 TSNQ15631 228 aaKnown RBP12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 PPP1R3AQ16821 1122 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 CDKL4Q5MAI5 379 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 ICE2Q659A1 982 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 GPSM1Q86YR5 675 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 GPR135Q8IZ08 494 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 TCAIMQ8N3R3 496 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 PPFIBP2Q8ND30 876 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 OR2A1Q8NGT9 310 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 KCNE4Q8WWG9 221 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 KIAA1191Q96A73 305 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 FBXL8Q96CD0 374 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 HAUS8Q9BT25 410 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 ACAT2Q9BWD1 397 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 PARD6BQ9BYG5 372 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 DPH1Q9BZG8 443 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 SLC7A5P2Q9GIP4 190 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 ATG10Q9H0Y0 220 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 CNOT10Q9H9A5 744 aaKnown RBP12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 APMAPQ9HDC9 416 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 RNF112Q9ULX5 631 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 SNX7Q9UNH6 387 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 KLK4Q9Y5K2 254 aa12.29□□□□□ -0.44
TRAPPC1-206ENST00000573989 APC2O95996 2303 aa12.28□□□□□ -0.44
TRAPPC1-206ENST00000573989 WDFY3Q8IZQ1 3526 aa12.28□□□□□ -0.44
TRAPPC1-206ENST00000573989 SDK2Q58EX2 2172 aa12.28□□□□□ -0.44
TRAPPC1-206ENST00000573989 HMX2A2RU54 273 aa12.28□□□□□ -0.44
TRAPPC1-206ENST00000573989 SYCE1LA8MT33 242 aa12.28□□□□□ -0.44
TRAPPC1-206ENST00000573989 TRIM49D1C9J1S8 452 aa12.28□□□□□ -0.44
TRAPPC1-206ENST00000573989 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC1-206ENST00000573989 KLHL2O95198 593 aa12.28□□□□□ -0.44
TRAPPC1-206ENST00000573989 MT-ND3P03897 115 aa12.28□□□□□ -0.44
TRAPPC1-206ENST00000573989 ALDOAP04075 364 aaKnown RBP12.28□□□□□ -0.44
TRAPPC1-206ENST00000573989 CAPNS1P04632 268 aa12.28□□□□□ -0.44
TRAPPC1-206ENST00000573989 HBQ1P09105 142 aa12.28□□□□□ -0.44
TRAPPC1-206ENST00000573989 LIPCP11150 499 aa12.28□□□□□ -0.44
TRAPPC1-206ENST00000573989 TFEBP19484 476 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms