RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 TGM1P22735 817 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 HOXA9P31269 272 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 FPGSQ05932 587 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 ZXDCQ2QGD7 858 aaPredicted RBP18.56■□□□□ 0.56
SCARF1-206ENST00000573852 INO80DQ53TQ3 878 aaPredicted RBP18.56■□□□□ 0.56
SCARF1-206ENST00000573852 CST9Q5W186 159 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 ADCK1Q86TW2 530 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 TMEM173Q86WV6 379 aaPredicted RBP18.56■□□□□ 0.56
SCARF1-206ENST00000573852 ZNF540Q8NDQ6 660 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 SELENOMQ8WWX9 145 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 RPL3LQ92901 407 aaKnown RBP18.56■□□□□ 0.56
SCARF1-206ENST00000573852 TBC1D20Q96BZ9 403 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 RDH14Q9HBH5 336 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 SCN3BQ9NY72 215 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 SAMD4AQ9UPU9 718 aaKnown RBP18.56■□□□□ 0.56
SCARF1-206ENST00000573852 TRBV5-4A0A0C4DH59 114 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 A8MX80 341 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 BPIP17213 487 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 SDC1P18827 310 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 CCND3P30281 292 aaPredicted RBP18.56■□□□□ 0.56
SCARF1-206ENST00000573852 GKP32189 559 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 TGFBR1P36897 503 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 CXCR4P61073 352 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 CHRNA6Q15825 494 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 OR4F3Q6IEY1 312 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 TTC29Q8NA56 475 aaPredicted RBP18.56■□□□□ 0.56
SCARF1-206ENST00000573852 ABCG8Q9H221 673 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 TM9SF3Q9HD45 589 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 AASDHPPTQ9NRN7 309 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 GIN1Q9NXP7 522 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 WDR37Q9Y2I8 494 aa18.56■□□□□ 0.56
SCARF1-206ENST00000573852 RFXANKO14593 260 aa18.55■□□□□ 0.56
SCARF1-206ENST00000573852 AQP9O43315 295 aa18.55■□□□□ 0.56
SCARF1-206ENST00000573852 HOXB6P17509 224 aaKnown RBP18.55■□□□□ 0.56
SCARF1-206ENST00000573852 HIST2H2ACQ16777 129 aaPredicted RBP18.55■□□□□ 0.56
SCARF1-206ENST00000573852 INAVAQ3KP66 663 aa18.55■□□□□ 0.56
SCARF1-206ENST00000573852 ZCCHC8Q6NZY4 707 aaKnown RBP18.55■□□□□ 0.56
SCARF1-206ENST00000573852 VTCN1Q7Z7D3 282 aa18.55■□□□□ 0.56
SCARF1-206ENST00000573852 ACOT13Q9NPJ3 140 aa18.55■□□□□ 0.56
SCARF1-206ENST00000573852 THG1LQ9NWX6 298 aaKnown RBP18.55■□□□□ 0.56
SCARF1-206ENST00000573852 VPS51Q9UID3 782 aa18.55■□□□□ 0.56
SCARF1-206ENST00000573852 CRLS1Q9UJA2 301 aa18.55■□□□□ 0.56
SCARF1-206ENST00000573852 NDRG4Q9ULP0 352 aaKnown RBP18.55■□□□□ 0.56
SCARF1-206ENST00000573852 ZNF232Q9UNY5 417 aa18.55■□□□□ 0.56
SCARF1-206ENST00000573852 HSPE1-MOB4S4R3N1 261 aa18.55■□□□□ 0.56
SCARF1-206ENST00000573852 VLDLRP98155 873 aa18.55■□□□□ 0.56
SCARF1-206ENST00000573852 MACC1Q6ZN28 852 aa18.55■□□□□ 0.56
SCARF1-206ENST00000573852 CCDC71Q8IV32 467 aaPredicted RBP18.55■□□□□ 0.56
SCARF1-206ENST00000573852 APIPQ96GX9 242 aa18.55■□□□□ 0.56
SCARF1-206ENST00000573852 PDP1Q9P0J1 537 aaPredicted RBP18.55■□□□□ 0.56
SCARF1-206ENST00000573852 ERVW-1Q9UQF0 538 aa18.55■□□□□ 0.56
SCARF1-206ENST00000573852 RGS10O43665 173 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 TBL1XO60907 577 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 NBNO60934 754 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 PRPS2P11908 318 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 RPL17P18621 184 aaKnown RBP18.54■□□□□ 0.56
SCARF1-206ENST00000573852 ST13P50502 369 aaKnown RBP18.54■□□□□ 0.56
SCARF1-206ENST00000573852 ARHGDIAP52565 204 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 FCGRTP55899 365 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 SMARCB1Q12824 385 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 MAD2L1BPQ15013 274 aaPredicted RBP18.54■□□□□ 0.56
SCARF1-206ENST00000573852 METTL2BQ6P1Q9 378 aaKnown RBP18.54■□□□□ 0.56
SCARF1-206ENST00000573852 PHF10Q8WUB8 498 aaKnown RBP18.54■□□□□ 0.56
SCARF1-206ENST00000573852 POP5Q969H6 163 aaKnown RBP18.54■□□□□ 0.56
SCARF1-206ENST00000573852 TESCQ96BS2 214 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 ABHD8Q96I13 439 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 PSD2Q9BQI7 771 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 HERC2P3Q9BVR0 1158 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 SLC32A1Q9H598 525 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 RASSF1Q9NS23 344 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 TMEM161AQ9NX61 479 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 SCN8AQ9UQD0 1980 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 HTTP42858 3142 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 GLYATL1P3A0A0U1RQE8 302 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 TTC34A8MYJ7 566 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 FAM20BO75063 409 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 ANXA5P08758 320 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 DNAJA1P31689 397 aaKnown RBP18.54■□□□□ 0.56
SCARF1-206ENST00000573852 HNF1BP35680 557 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 SERPINB10P48595 397 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 RPIAP49247 311 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 ZNF157P51786 506 aaPredicted RBP18.54■□□□□ 0.56
SCARF1-206ENST00000573852 CDKN3Q16667 212 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 TTLL9Q3SXZ7 439 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 CATSPEREQ5SY80 951 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 IFNL1Q8IU54 200 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 WFDC5Q8TCV5 224 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 APOL4Q9BPW4 351 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 HEPHQ9BQS7 1158 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 ASPSCR1Q9BZE9 553 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 SLIRPQ9GZT3 109 aaKnown RBP18.54■□□□□ 0.56
SCARF1-206ENST00000573852 ARL15Q9NXU5 204 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 AFF4Q9UHB7 1163 aaKnown RBP18.54■□□□□ 0.56
SCARF1-206ENST00000573852 OR51B4Q9Y5P0 310 aa18.54■□□□□ 0.56
SCARF1-206ENST00000573852 C2orf78A6NCI8 922 aa18.53■□□□□ 0.56
SCARF1-206ENST00000573852 MANSC4A6NHS7 340 aaPredicted RBP18.53■□□□□ 0.56
SCARF1-206ENST00000573852 SMAD6O43541 496 aaKnown RBP18.53■□□□□ 0.56
SCARF1-206ENST00000573852 CNOT3O75175 753 aaKnown RBP18.53■□□□□ 0.56
SCARF1-206ENST00000573852 TRBC1P01850 177 aa18.53■□□□□ 0.56
SCARF1-206ENST00000573852 FPR1P21462 350 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms