RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 TXLNGYQ9BZA5 131 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 FBXO8Q9NRD0 319 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 PCDHGA3Q9Y5H0 932 aa15.24■□□□□ 0.03
CHD3-215ENST00000572750 A0A087WUV0 522 aaPredicted RBP15.23■□□□□ 0.03
CHD3-215ENST00000572750 CDC7O00311 574 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 RIPK2O43353 540 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 IMPA1P29218 277 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 PMS2P54278 862 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 RAB10P61026 200 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 ARHGAP19Q14CB8 494 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 SF1Q15637 639 aaKnown RBP15.23■□□□□ 0.03
CHD3-215ENST00000572750 KIAA1614Q5VZ46 1190 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 SBSNQ6UWP8 590 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 CDHR3Q6ZTQ4 885 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 SPATA6LQ8N4H0 392 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 NKAPQ8N5F7 415 aaKnown RBP15.23■□□□□ 0.03
CHD3-215ENST00000572750 LSM14AQ8ND56 463 aaKnown RBP15.23■□□□□ 0.03
CHD3-215ENST00000572750 ZNF248Q8NDW4 579 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 SLC22A18Q96BI1 424 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 MIPEPQ99797 713 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 ACAT2Q9BWD1 397 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 ASPSCR1Q9BZE9 553 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 PARVBQ9HBI1 364 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 SYTL2Q9HCH5 934 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 PDE7BQ9NP56 450 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 FGF21Q9NSA1 209 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 ABCF3Q9NUQ8 709 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 UTP6Q9NYH9 597 aaKnown RBP15.23■□□□□ 0.03
CHD3-215ENST00000572750 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.23■□□□□ 0.03
CHD3-215ENST00000572750 STOX2Q9P2F5 926 aaPredicted RBP15.23■□□□□ 0.03
CHD3-215ENST00000572750 ACSL6Q9UKU0 697 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 PCDHB11Q9Y5F2 797 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 AHCTF1Q8WYP5 2266 aa15.23■□□□□ 0.03
CHD3-215ENST00000572750 HMX2A2RU54 273 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 SLC16A5O15375 505 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 PRICKLE3O43900 615 aaPredicted RBP15.22■□□□□ 0.03
CHD3-215ENST00000572750 NRP2O60462 931 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 TIAF1O95411 115 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 INHBAP08476 426 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 ABHD2P08910 425 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 ZNF28P17035 718 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 OAS2P29728 719 aaKnown RBP15.22■□□□□ 0.03
CHD3-215ENST00000572750 EIF2S3P41091 472 aaKnown RBP15.22■□□□□ 0.03
CHD3-215ENST00000572750 TBPL1P62380 186 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 VSNL1P62760 191 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 YBX1P67809 324 aaKnown RBP15.22■□□□□ 0.03
CHD3-215ENST00000572750 TUBB4BP68371 445 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 ACY1Q03154 408 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 TSNQ15631 228 aaKnown RBP15.22■□□□□ 0.03
CHD3-215ENST00000572750 PPP1R3AQ16821 1122 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 TMTC4Q5T4D3 741 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 MROH9Q5TGP6 573 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 TRMT10CQ7L0Y3 403 aaKnown RBP15.22■□□□□ 0.03
CHD3-215ENST00000572750 OR2L3Q8NG85 312 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 OR2A1Q8NGT9 310 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 MCOLN3Q8TDD5 553 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 KCNE4Q8WWG9 221 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 SLC44A1Q8WWI5 657 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 SMPDL3AQ92484 453 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 PDLIM5Q96HC4 596 aaKnown RBP15.22■□□□□ 0.03
CHD3-215ENST00000572750 TEFMQ96QE5 360 aaKnown RBP15.22■□□□□ 0.03
CHD3-215ENST00000572750 EPB41L4BQ9H329 900 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 FAM60AQ9NP50 221 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 WDR70Q9NW82 654 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 ARL15Q9NXU5 204 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 TAC3Q9UHF0 121 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 RARRES3Q9UL19 164 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 RELNP78509 3460 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 COL6A6A6NMZ7 2263 aa15.22■□□□□ 0.03
CHD3-215ENST00000572750 TEP1Q99973 2627 aaKnown RBP15.21■□□□□ 0.03
CHD3-215ENST00000572750 NBPF19A0A087WUL8 3843 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 TEX51A0A1B0GUA7 166 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 EXOC1LA0A1B0GW35 172 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 PABPN1LA6NDY0 278 aaKnown RBP15.21■□□□□ 0.03
CHD3-215ENST00000572750 ZNF839A8K0R7 811 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 TMEM150CB9EJG8 249 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 E7ENX8 843 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 POC1B-GALNT4F8VUJ3 575 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 STMND1H3BQB6 276 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 MAP3K7O43318 606 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 HCRTR1O43613 425 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 STK17BO94768 372 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 GUCA1CO95843 209 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 SLC35E2BP0CK96 405 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 CCDC166P0CW27 439 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 FGF5P12034 268 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 CD82P27701 267 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 RPA3P35244 121 aaPredicted RBP15.21■□□□□ 0.03
CHD3-215ENST00000572750 HSD17B2P37059 387 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 TAP2Q03519 686 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 CLN3Q13286 438 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 IL11RAQ14626 422 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 TGIF1Q15583 401 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 RAPH1Q70E73 1250 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 PPP1R3BQ86XI6 285 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 LRRC56Q8IYG6 542 aaPredicted RBP15.21■□□□□ 0.03
CHD3-215ENST00000572750 EIF1ADQ8N9N8 165 aaKnown RBP15.21■□□□□ 0.03
CHD3-215ENST00000572750 ZNF501Q96CX3 271 aaPredicted RBP15.21■□□□□ 0.03
CHD3-215ENST00000572750 MED8Q96G25 268 aa15.21■□□□□ 0.03
CHD3-215ENST00000572750 CCDC138Q96M89 665 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms