RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 HSF1Q00613 529 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 ZKSCAN8Q15776 578 aaPredicted RBP5.35□□□□□ -1.55
SF3B3-214ENST00000572365 ISXQ2M1V0 245 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 UBAP2Q5T6F2 1119 aaKnown RBP5.35□□□□□ -1.55
SF3B3-214ENST00000572365 TMEM215Q68D42 235 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 MZT2BQ6NZ67 158 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 NCEH1Q6PIU2 408 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 LSMEM2Q8N112 164 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 BOLLQ8N9W6 283 aaKnown RBP5.35□□□□□ -1.55
SF3B3-214ENST00000572365 OSR1Q8TAX0 266 aaPredicted RBP5.35□□□□□ -1.55
SF3B3-214ENST00000572365 ZNF564Q8TBZ8 553 aaPredicted RBP5.35□□□□□ -1.55
SF3B3-214ENST00000572365 NOC3LQ8WTT2 800 aaKnown RBP5.35□□□□□ -1.55
SF3B3-214ENST00000572365 KIFAP3Q92845 792 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 KLK6Q92876 244 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 MYLPFQ96A32 169 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 SERAC1Q96JX3 654 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 C5orf34Q96MH7 638 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 FAM210AQ96ND0 272 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 XPO6Q96QU8 1125 aaKnown RBP5.35□□□□□ -1.55
SF3B3-214ENST00000572365 KCNK16Q96T55 309 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 PKMYT1Q99640 499 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 PAIP2Q9BPZ3 127 aaKnown RBP5.35□□□□□ -1.55
SF3B3-214ENST00000572365 MSTO1Q9BUK6 570 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 LHX5Q9H2C1 402 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 PLEKHA5Q9HAU0 1116 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 TUFT1Q9NNX1 390 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 GDF3Q9NR23 364 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 BLOC1S4Q9NUP1 217 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 DDX19AQ9NUU7 478 aaKnown RBP5.35□□□□□ -1.55
SF3B3-214ENST00000572365 THAP10Q9P2Z0 257 aaPredicted RBP5.35□□□□□ -1.55
SF3B3-214ENST00000572365 FBXO9Q9UK97 447 aaPredicted RBP5.35□□□□□ -1.55
SF3B3-214ENST00000572365 NFE2L3Q9Y4A8 694 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 SNX9Q9Y5X1 595 aa5.35□□□□□ -1.55
SF3B3-214ENST00000572365 FBN3Q75N90 2809 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 SPG11Q96JI7 2443 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 SHANK1Q9Y566 2161 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 OR6C68A6NDL8 312 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 SMTNL1A8MU46 457 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 CPLX1O14810 134 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 NEMFO60524 1076 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 HUS1O60921 280 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 DEXIO95424 95 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 CLDN1O95832 211 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 LATS1O95835 1130 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 KRT19P08727 400 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 CDK4P11802 303 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 FCGR2AP12318 317 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 PRF1P14222 555 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 ANXA13P27216 316 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 CASQ1P31415 396 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 ARL1P40616 181 aaPredicted RBP5.34□□□□□ -1.55
SF3B3-214ENST00000572365 LIG4P49917 911 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 GALCP54803 685 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 SLC12A2P55011 1212 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 TFAMQ00059 246 aaKnown RBP5.34□□□□□ -1.55
SF3B3-214ENST00000572365 MYL7Q01449 175 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 CDKN3Q16667 212 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 C5orf22Q49AR2 442 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 TMEM119Q4V9L6 283 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 MDH1BQ5I0G3 518 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 C4orf50Q6ZRC1 276 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 NEK10Q6ZWH5 1172 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 ZFAND4Q86XD8 727 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 CSGALNACT2Q8N6G5 542 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 TMEM161BQ8NDZ6 487 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 ZNF397Q8NF99 534 aaPredicted RBP5.34□□□□□ -1.55
SF3B3-214ENST00000572365 MAPK15Q8TD08 544 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 PDCD6IPQ8WUM4 868 aaKnown RBP5.34□□□□□ -1.55
SF3B3-214ENST00000572365 FBXO32Q969P5 355 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 FRG2BQ96QU4 278 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 NR1H4Q96RI1 486 aaPredicted RBP5.34□□□□□ -1.55
SF3B3-214ENST00000572365 ACBD6Q9BR61 282 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 NACA2Q9H009 215 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 NEUROG2Q9H2A3 272 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 ARGLU1Q9NWB6 273 aaPredicted RBP5.34□□□□□ -1.55
SF3B3-214ENST00000572365 KCND2Q9NZV8 630 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 ORC3Q9UBD5 711 aaPredicted RBP5.34□□□□□ -1.55
SF3B3-214ENST00000572365 NME7Q9Y5B8 376 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 CLDN16Q9Y5I7 305 aa5.34□□□□□ -1.55
SF3B3-214ENST00000572365 TRPM6Q9BX84 2022 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 C17orf113A0A1B0GUU1 675 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 A0A1W2PR77 199 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 PGPEP1LA6NFU8 196 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 CDRT15L2A8MXV6 281 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 K7EM74 188 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 OGTO15294 1046 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 PAPSS1O43252 624 aaPredicted RBP5.33□□□□□ -1.56
SF3B3-214ENST00000572365 FAM189A1O60320 539 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 CACNG3O60359 315 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 DFNA5O60443 496 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 OLFM2O95897 454 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 SLPIP03973 132 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 CHMP24386 653 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 YWHAQP27348 245 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 RPA1P27694 616 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 ARRB1P49407 418 aaPredicted RBP5.33□□□□□ -1.56
SF3B3-214ENST00000572365 DUSP3P51452 185 aaPredicted RBP5.33□□□□□ -1.56
SF3B3-214ENST00000572365 MFAP3P55082 362 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 SMARCB1Q12824 385 aa5.33□□□□□ -1.56
SF3B3-214ENST00000572365 ILKQ13418 452 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms