RNA–Protein interactions for RNA: ENST00000570818.5

CDC27-212, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-212ENST00000570818 PIGQQ9BRB3 760 aa5.05□□□□□ -1.6
CDC27-212ENST00000570818 Q9N2K0 584 aa5.05□□□□□ -1.6
CDC27-212ENST00000570818 PIH1D3Q9NQM4 214 aaKnown RBP5.05□□□□□ -1.6
CDC27-212ENST00000570818 SPHK2Q9NRA0 654 aa5.05□□□□□ -1.6
CDC27-212ENST00000570818 MAN2C1Q9NTJ4 1040 aa5.05□□□□□ -1.6
CDC27-212ENST00000570818 O00370 1275 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 TRUB2O95900 331 aaKnown RBP5.04□□□□□ -1.6
CDC27-212ENST00000570818 NNMTP40261 264 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 OPRL1P41146 370 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 CCR10P46092 362 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 MS4A2Q01362 244 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 GUCY2DQ02846 1103 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 ELAVL2Q12926 359 aaKnown RBP5.04□□□□□ -1.6
CDC27-212ENST00000570818 FASTKD3Q14CZ7 662 aaKnown RBP5.04□□□□□ -1.6
CDC27-212ENST00000570818 MTHFSDQ2M296 383 aaKnown RBP5.04□□□□□ -1.6
CDC27-212ENST00000570818 UGT3A2Q3SY77 523 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 FAM198BQ6UWH4 519 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 LGI2Q8N0V4 545 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.04□□□□□ -1.6
CDC27-212ENST00000570818 AVL9Q8NBF6 648 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 OR1L3Q8NH93 324 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 GPATCH1Q9BRR8 931 aaKnown RBP5.04□□□□□ -1.6
CDC27-212ENST00000570818 MXD3Q9BW11 206 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 CCDC106Q9BWC9 280 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 CHMP4AQ9BY43 222 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 SHARPINQ9H0F6 387 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 SLC7A10Q9NS82 523 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 TEX10Q9NXF1 929 aaPredicted RBP5.04□□□□□ -1.6
CDC27-212ENST00000570818 RPS6KA6Q9UK32 745 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 CPSF3Q9UKF6 684 aaKnown RBP5.04□□□□□ -1.6
CDC27-212ENST00000570818 PPP2R2CQ9Y2T4 447 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 ANGPTL3Q9Y5C1 460 aa5.04□□□□□ -1.6
CDC27-212ENST00000570818 COL5A2P05997 1499 aaPredicted RBP5.04□□□□□ -1.6
CDC27-212ENST00000570818 TP53BP1Q12888 1972 aaPredicted RBP5.04□□□□□ -1.6
CDC27-212ENST00000570818 A0A1B0GVY2 172 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 FEZF1A0PJY2 475 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 ERAL1O75616 437 aaKnown RBP5.03□□□□□ -1.6
CDC27-212ENST00000570818 GFPT2O94808 682 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 TOMM70O94826 608 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 RAB40ALP0C0E4 278 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 IRF2P14316 349 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 DARSP14868 501 aaKnown RBP5.03□□□□□ -1.6
CDC27-212ENST00000570818 PRKACGP22612 351 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 HLA-FP30511 346 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 ACTN2P35609 894 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 MAPK12P53778 367 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 DSCR10P59022 87 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 RAPSNQ13702 412 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 XKR3Q5GH77 459 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 PRR27Q6MZM9 219 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 BTN2A1Q7KYR7 527 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 MOB3AQ96BX8 217 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 FAM20AQ96MK3 541 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 NECTIN4Q96NY8 510 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 DGAT2Q96PD7 388 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 ZNF300Q96RE9 604 aaPredicted RBP5.03□□□□□ -1.6
CDC27-212ENST00000570818 LRRC61Q9BV99 259 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 APOL6Q9BWW8 343 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 GOLPH3LQ9H4A5 285 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 ANKZF1Q9H8Y5 726 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 NUDT4Q9NZJ9 180 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 TMED3Q9Y3Q3 217 aa5.03□□□□□ -1.6
CDC27-212ENST00000570818 hCG_1809904A0A1W2PP81 198 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 A0A1W2PPE2 198 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 A0A1W2PR64 198 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 H0YAE9 185 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 CYP2A7P20853 494 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 MYL7Q01449 175 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 SNAI3Q3KNW1 292 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 MCMDC2Q4G0Z9 681 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 UGT3A1Q6NUS8 523 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 NOTUMQ6P988 496 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 NUP54Q7Z3B4 507 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 MMD2Q8IY49 270 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 NUP37Q8NFH4 326 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 GTF3AQ92664 365 aaKnown RBP5.02□□□□□ -1.61
CDC27-212ENST00000570818 PRRG4Q9BZD6 226 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 MAF1Q9H063 256 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 THAP2Q9H0W7 228 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 NOL11Q9H8H0 719 aaKnown RBP5.02□□□□□ -1.61
CDC27-212ENST00000570818 MED20Q9H944 212 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 PANK3Q9H999 370 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 HAO2Q9NYQ3 351 aa5.02□□□□□ -1.61
CDC27-212ENST00000570818 TCRBV21S2A2A0A5A6 115 aa5.01□□□□□ -1.61
CDC27-212ENST00000570818 ZSCAN5DPP0CG00 497 aa5.01□□□□□ -1.61
CDC27-212ENST00000570818 GATA1P15976 413 aaPredicted RBP5.01□□□□□ -1.61
CDC27-212ENST00000570818 LBX1P52954 281 aa5.01□□□□□ -1.61
CDC27-212ENST00000570818 TMEM50BP56557 158 aa5.01□□□□□ -1.61
CDC27-212ENST00000570818 GCNT1Q02742 428 aa5.01□□□□□ -1.61
CDC27-212ENST00000570818 CUL3Q13618 768 aa5.01□□□□□ -1.61
CDC27-212ENST00000570818 EFTUD2Q15029 972 aaKnown RBP eCLIP5.01□□□□□ -1.617e-10■■□□□ 12.2
CDC27-212ENST00000570818 WDR78Q5VTH9 848 aa5.01□□□□□ -1.61
CDC27-212ENST00000570818 PAQR6Q6TCH4 344 aa5.01□□□□□ -1.61
CDC27-212ENST00000570818 RYBPQ8N488 228 aaPredicted RBP5.01□□□□□ -1.61
CDC27-212ENST00000570818 POMGNT2Q8NAT1 580 aa5.01□□□□□ -1.61
CDC27-212ENST00000570818 TDRD5Q8NAT2 981 aaKnown RBP5.01□□□□□ -1.61
CDC27-212ENST00000570818 OR4K1Q8NGD4 311 aa5.01□□□□□ -1.61
CDC27-212ENST00000570818 GATAD1Q8WUU5 269 aa5.01□□□□□ -1.61
CDC27-212ENST00000570818 ZNF830Q96NB3 372 aaPredicted RBP5.01□□□□□ -1.61
CDC27-212ENST00000570818 LPAR4Q99677 370 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms