RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 TARM1B6A8C7 271 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 CATP04040 527 aaKnown RBP13.86□□□□□ -0.19
CMTM3-215ENST00000568477 CD63P08962 238 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 ATXN8OSP0DMR3 200 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 PSMB5P28074 263 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 FOLR3P41439 243 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 GRIA3P42263 894 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 CCL11P51671 97 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 ARSFP54793 590 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 PTK6Q13882 451 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 CYP2A13Q16696 494 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 KLHL38Q2WGJ6 581 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 NKAIN1Q4KMZ8 207 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 TCTE1Q5JU00 501 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 FCRL6Q6DN72 434 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 ZNF572Q7Z3I7 529 aaPredicted RBP13.86□□□□□ -0.19
CMTM3-215ENST00000568477 AGGF1Q8N302 714 aaeCLIP13.86□□□□□ -0.19
CMTM3-215ENST00000568477 TEX19Q8NA77 164 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.86□□□□□ -0.19
CMTM3-215ENST00000568477 LRRN4CLQ8ND94 238 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 OR9A1PQ8NGU1 263 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 ZUFSPQ96AP4 578 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 MIPEPQ99797 713 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 FAM167BQ9BTA0 163 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 SLC25A23Q9BV35 468 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 KLHL42Q9P2K6 505 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 PTRH2Q9Y3E5 179 aaKnown RBP13.86□□□□□ -0.19
CMTM3-215ENST00000568477 PCDHGA9Q9Y5G4 932 aaKnown RBP13.86□□□□□ -0.19
CMTM3-215ENST00000568477 FAM169AQ9Y6X4 670 aa13.86□□□□□ -0.19
CMTM3-215ENST00000568477 A0A1B0GX78 115 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 DNALI1O14645 258 aaPredicted RBP13.85□□□□□ -0.19
CMTM3-215ENST00000568477 PSIP1O75475 530 aaKnown RBP13.85□□□□□ -0.19
CMTM3-215ENST00000568477 F7P08709 466 aaPredicted RBP13.85□□□□□ -0.19
CMTM3-215ENST00000568477 PGAM1P18669 254 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 ALAS2P22557 587 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 OTX2P32243 289 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 CLCN7P51798 805 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 PGDP52209 483 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 RRADP55042 308 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 ATP1A4Q13733 1029 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 GRM7Q14831 915 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 SLC9A5Q14940 896 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 NAA25Q14CX7 972 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 ERCC6LQ2NKX8 1250 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.85□□□□□ -0.19
CMTM3-215ENST00000568477 NEK10Q6ZWH5 1172 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 MED25Q71SY5 747 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 MRGPREQ86SM8 312 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 CREG2Q8IUH2 290 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 TMEM102Q8N9M5 508 aaPredicted RBP13.85□□□□□ -0.19
CMTM3-215ENST00000568477 OR2L3Q8NG85 312 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 OR2A1Q8NGT9 310 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 KCNJ9Q92806 393 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 SLCO2A1Q92959 643 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 IP6K3Q96PC2 410 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 SLC30A3Q99726 388 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 SELENOSQ9BQE4 189 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 FBXO5Q9UKT4 447 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 G3BP2Q9UN86 482 aaKnown RBP13.85□□□□□ -0.19
CMTM3-215ENST00000568477 KLK4Q9Y5K2 254 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 COMMD10Q9Y6G5 202 aa13.85□□□□□ -0.19
CMTM3-215ENST00000568477 UBR5O95071 2799 aaPredicted RBP13.85□□□□□ -0.19
CMTM3-215ENST00000568477 A0A1W2PPV9 198 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 ZNF839A8K0R7 811 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 MYO1CO00159 1063 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 CTSVO60911 334 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 KLF7O75840 302 aaPredicted RBP13.84□□□□□ -0.19
CMTM3-215ENST00000568477 PDGFAP04085 211 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 ERGP11308 486 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 ENO3P13929 434 aaPredicted RBP13.84□□□□□ -0.19
CMTM3-215ENST00000568477 CMPK1P30085 196 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 HSD17B2P37059 387 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 GCGRP47871 477 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 FASTKQ14296 549 aaKnown RBP13.84□□□□□ -0.19
CMTM3-215ENST00000568477 CRYMQ14894 314 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 ARHGAP19Q14CB8 494 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 HSP90AA5PQ58FG0 334 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 YOD1Q5VVQ6 348 aaPredicted RBP13.84□□□□□ -0.19
CMTM3-215ENST00000568477 ZNF549Q6P9A3 640 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 TTLL10Q6ZVT0 673 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 PCGF5Q86SE9 256 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 KCNMB4Q86W47 210 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 TTC29Q8NA56 475 aaPredicted RBP13.84□□□□□ -0.19
CMTM3-215ENST00000568477 OR2Y1Q8NGV0 311 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 GIMAP7Q8NHV1 300 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 GABPB2Q8TAK5 448 aaPredicted RBP13.84□□□□□ -0.19
CMTM3-215ENST00000568477 SMPDL3AQ92484 453 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 INPP5DQ92835 1189 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 CAPZA3Q96KX2 299 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 ZNF285Q96NJ3 590 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 IARS2Q9NSE4 1012 aaKnown RBP13.84□□□□□ -0.19
CMTM3-215ENST00000568477 CUTCQ9NTM9 273 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 PCYOX1Q9UHG3 505 aa13.84□□□□□ -0.19
CMTM3-215ENST00000568477 PEX12O00623 359 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 DSCR3O14972 297 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 SRPX2O60687 465 aaPredicted RBP13.83□□□□□ -0.2
CMTM3-215ENST00000568477 VPS26AO75436 327 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 CEACAM4O75871 244 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 TTC4O95801 387 aa13.83□□□□□ -0.2
CMTM3-215ENST00000568477 MPC1LP0DKB6 136 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms