RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 KIAA1614Q5VZ46 1190 aa17.35■□□□□ 0.37
COMMD4-222ENST00000568034 C16orf46Q6P387 395 aa17.35■□□□□ 0.37
COMMD4-222ENST00000568034 CARFQ8N187 725 aa17.35■□□□□ 0.37
COMMD4-222ENST00000568034 OR2L3Q8NG85 312 aa17.35■□□□□ 0.37
COMMD4-222ENST00000568034 ATL1Q8WXF7 558 aa17.35■□□□□ 0.37
COMMD4-222ENST00000568034 PYCR2Q96C36 320 aa17.35■□□□□ 0.37
COMMD4-222ENST00000568034 SLC41A2Q96JW4 573 aa17.35■□□□□ 0.37
COMMD4-222ENST00000568034 TRAPPC9Q96Q05 1148 aa17.35■□□□□ 0.37
COMMD4-222ENST00000568034 OR4K3Q96R72 315 aa17.35■□□□□ 0.37
COMMD4-222ENST00000568034 EGFL8Q99944 293 aa17.35■□□□□ 0.37
COMMD4-222ENST00000568034 CCDC177Q9NQR7 707 aaPredicted RBP17.35■□□□□ 0.37
COMMD4-222ENST00000568034 C1GALT1Q9NS00 363 aa17.35■□□□□ 0.37
COMMD4-222ENST00000568034 MKS1Q9NXB0 559 aa17.35■□□□□ 0.37
COMMD4-222ENST00000568034 TAC3Q9UHF0 121 aa17.35■□□□□ 0.37
COMMD4-222ENST00000568034 PTBP2Q9UKA9 531 aaKnown RBP17.35■□□□□ 0.37
COMMD4-222ENST00000568034 SH2B3Q9UQQ2 575 aa17.35■□□□□ 0.37
COMMD4-222ENST00000568034 ASB1Q9Y576 335 aa17.35■□□□□ 0.37
COMMD4-222ENST00000568034 PMS2P1A4D2B8 440 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 PABPN1LA6NDY0 278 aaKnown RBP17.34■□□□□ 0.37
COMMD4-222ENST00000568034 A8MU76 341 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 SUPT3HB4E1H0 165 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 HGSO14964 777 aaPredicted RBP17.34■□□□□ 0.37
COMMD4-222ENST00000568034 PRAMEF10O60809 474 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 GLRA3O75311 464 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 SUPT3HO75486 399 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 RASSF9O75901 435 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 GSTA1P08263 222 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 RBP1P09455 135 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 CREB1P16220 341 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 CDH3P22223 829 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 GGT5P36269 586 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 HNMTP50135 292 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 ZIC1Q15915 447 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 PTCHD3Q3KNS1 767 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 FBXO48Q5FWF7 155 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 SULT1C3Q6IMI6 304 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 SRRM1Q8IYB3 904 aaKnown RBP17.34■□□□□ 0.37
COMMD4-222ENST00000568034 BANPQ8N9N5 519 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 UBTD2Q8WUN7 234 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 SLC22A18Q96BI1 424 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 GRAMD1AQ96CP6 724 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 PGM2Q96G03 612 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 TSNARE1Q96NA8 513 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 MIPEPQ99797 713 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 MRPL57Q9BQC6 102 aaKnown RBP17.34■□□□□ 0.37
COMMD4-222ENST00000568034 ACAT2Q9BWD1 397 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 MRPL46Q9H2W6 279 aaKnown RBP17.34■□□□□ 0.37
COMMD4-222ENST00000568034 SLC6A20Q9NP91 592 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 INTS7Q9NVH2 962 aaKnown RBP17.34■□□□□ 0.37
COMMD4-222ENST00000568034 SIDT1Q9NXL6 827 aaKnown RBP17.34■□□□□ 0.37
COMMD4-222ENST00000568034 CD274Q9NZQ7 290 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 KLK13Q9UKR3 277 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 PCDHB11Q9Y5F2 797 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 KLK4Q9Y5K2 254 aa17.34■□□□□ 0.37
COMMD4-222ENST00000568034 IGKV1-8A0A0C4DH67 115 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 SLC9B1P1A6NJY1 282 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 SYCE1LA8MT33 242 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 MAP2K7O14733 419 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 RGS16O15492 202 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-222ENST00000568034 SPINK2P20155 84 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 CRHR1P34998 444 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 RPA3P35244 121 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-222ENST00000568034 GDF5P43026 501 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 SEPHS1P49903 392 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 CAMK2BQ13554 666 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 TSTA3Q13630 321 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-222ENST00000568034 PRAMEF13Q5VWM6 474 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 ICE2Q659A1 982 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 CAPN13Q6MZZ7 669 aaPredicted RBP17.33■□□□□ 0.36
COMMD4-222ENST00000568034 CROCCP2Q86T23 111 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 TCAIMQ8N3R3 496 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 ESAMQ96AP7 390 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 MED8Q96G25 268 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 SCYL1Q96KG9 808 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 KLHL25Q9H0H3 589 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 CPSF2Q9P2I0 782 aaKnown RBP17.33■□□□□ 0.36
COMMD4-222ENST00000568034 DCDC2Q9UHG0 476 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 BTRCQ9Y297 605 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 KLHL20Q9Y2M5 609 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 PCM1Q15154 2024 aa17.33■□□□□ 0.36
COMMD4-222ENST00000568034 NCOR2Q9Y618 2525 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 CCDC187A0A096LP49 1063 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 TMX2-CTNND1H3BSU7 103 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 AGRPO00253 132 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 NRP2O60462 931 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 SASH3O75995 380 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 FKBP9O95302 570 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 ZBTB11O95625 1053 aaPredicted RBP17.32■□□□□ 0.36
COMMD4-222ENST00000568034 HGFP14210 728 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 NPPBP16860 134 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 NELFEP18615 380 aaKnown RBP17.32■□□□□ 0.36
COMMD4-222ENST00000568034 MAGP20916 626 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 CCND1P24385 295 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 GRIA3P42263 894 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 HSPA7P48741 367 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 AGTR2P50052 363 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 PRDX1Q06830 199 aaKnown RBP17.32■□□□□ 0.36
COMMD4-222ENST00000568034 SETDB1Q15047 1291 aa17.32■□□□□ 0.36
COMMD4-222ENST00000568034 SF1Q15637 639 aaKnown RBP17.32■□□□□ 0.36
COMMD4-222ENST00000568034 FCRL6Q6DN72 434 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms