RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 STX12Q86Y82 276 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 TBX5Q99593 518 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 C1QTNF1Q9BXJ1 281 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 OR51V1Q9H2C8 321 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 TM9SF3Q9HD45 589 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 EVLQ9UI08 416 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 MYH13Q9UKX3 1938 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 TRAV6A0A075B6T7 132 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 INSIG1O15503 277 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 HCN1O60741 890 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 GLUD1P00367 558 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 SLC35E2BP0CK96 405 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 CKBP12277 381 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 SSR2P43308 183 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 SCRN3Q0VDG4 424 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 ATP13A5Q4VNC0 1218 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 HFE2Q6ZVN8 426 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 SNX33Q8WV41 574 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 SLC35F5Q8WV83 523 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 IRGQQ8WZA9 623 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 DPAGT1Q9H3H5 408 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 L7N2F9 121 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 ZNF701M0R085 212 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 VILLO15195 856 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 DFNA5O60443 496 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 PRPS1L1P21108 318 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 CLK3P49761 638 aaKnown RBP12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 SMAD3P84022 425 aaKnown RBP12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 HNRNPA0Q13151 305 aaKnown RBP12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 SWI5Q1ZZU3 235 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 C6orf136Q5SQH8 315 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 MSANTD2Q6P1R3 559 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 RNF180Q86T96 592 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 SNX29P2Q8IUI4 249 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 WDTC1Q8N5D0 677 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 MINDY1Q8N5J2 469 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 FAM110BQ8TC76 370 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 TRPM4Q8TD43 1214 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 ZNF597Q96LX8 424 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 NSUN5Q96P11 429 aaKnown RBP12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 FAM105AQ9NUU6 356 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 HCN2Q9UL51 889 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 GRIP1Q9Y3R0 1128 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 PCDHGA7Q9Y5G6 932 aa12.12□□□□□ -0.47
CSPG4P13-202ENST00000567704 GON4LQ3T8J9 2241 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 H3BM21 787 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 NME4O00746 187 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 PEX10O60683 326 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 PEPDP12955 493 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 HTR1EP28566 365 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 HSPB3Q12988 150 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 SCARB2Q14108 478 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 KCNJ8Q15842 424 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 DPY19L3Q6ZPD9 716 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 ATAD1Q8NBU5 361 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 SH3YL1Q96HL8 342 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 CACNG4Q9UBN1 327 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 PLCL2Q9UPR0 1127 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 ABHD14A-ACY1A0A1B0GW23 586 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 QSOX1O00391 747 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 PDPK1O15530 556 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 CLDN11O75508 207 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 GDF5P43026 501 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 IL10RBQ08334 325 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 PAFAH1B3Q15102 231 aaKnown RBP12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 PRAMEF19Q5SWL8 479 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 SPAG16Q8N0X2 631 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 MYRFLQ96LU7 910 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 TMED9Q9BVK6 235 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 IL1RAPQ9NPH3 570 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 DNAJC27Q9NZQ0 273 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 FLRT1Q9NZU1 646 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 ZNF282Q9UDV7 671 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 IKZF2Q9UKS7 526 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 ALS2Q96Q42 1657 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 TACR2P21452 398 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 HOXD10P28358 340 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 CD47Q08722 323 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 ADAM15Q13444 863 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 NOL9Q5SY16 702 aaKnown RBP12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 XKRXQ6PP77 449 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 ZFP90Q8TF47 636 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 SMG7Q92540 1137 aaKnown RBP12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 TFAP2CQ92754 450 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 CORO1BQ9BR76 489 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 BCO2Q9BYV7 579 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 RSPH9Q9H1X1 276 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 MEAF6Q9HAF1 191 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 MS4A12Q9NXJ0 267 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 CPQQ9Y646 472 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 FXYD6-FXYD2A0A087WZ82 144 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 PDHXO00330 501 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 CDK14O94921 469 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 SOX14O95416 240 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 NPPAP01160 153 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 SPAM1P38567 509 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 RPP38P78345 283 aaKnown RBP12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 EMX2Q04743 252 aa12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 SLC10A2Q12908 348 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P13-202ENST00000567704 VGLL4Q14135 290 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms