RNA–Protein interactions for RNA: ENST00000567393.5

NEIL1-213, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 5

Gene NEIL1, Length 1,221 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-213ENST00000567393 HIST1H2AHQ96KK5 128 aa12.81□□□□□ -0.36
NEIL1-213ENST00000567393 GPR22Q99680 433 aa12.81□□□□□ -0.36
NEIL1-213ENST00000567393 HIST1H2AJQ99878 128 aa12.81□□□□□ -0.36
NEIL1-213ENST00000567393 H2AFJQ9BTM1 129 aa12.81□□□□□ -0.36
NEIL1-213ENST00000567393 TRIM54Q9BYV2 358 aa12.81□□□□□ -0.36
NEIL1-213ENST00000567393 L2HGDHQ9H9P8 463 aa12.81□□□□□ -0.36
NEIL1-213ENST00000567393 GPN2Q9H9Y4 310 aaPredicted RBP12.81□□□□□ -0.36
NEIL1-213ENST00000567393 NINJ2Q9NZG7 142 aa12.81□□□□□ -0.36
NEIL1-213ENST00000567393 ANKMY1Q9P2S6 941 aa12.81□□□□□ -0.36
NEIL1-213ENST00000567393 ADAMTS6Q9UKP5 1117 aa12.81□□□□□ -0.36
NEIL1-213ENST00000567393 PLCL2Q9UPR0 1127 aa12.81□□□□□ -0.36
NEIL1-213ENST00000567393 PDE10AQ9Y233 779 aa12.81□□□□□ -0.36
NEIL1-213ENST00000567393 EFSO43281 561 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 OR2B3O76000 313 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 NTRK1P04629 796 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 HBQ1P09105 142 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 PSMB5P28074 263 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 IMPA1P29218 277 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 ECHS1P30084 290 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 GRIA3P42263 894 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 GABRA4P48169 554 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 ABATP80404 500 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 TSTA3Q13630 321 aaPredicted RBP12.8□□□□□ -0.36
NEIL1-213ENST00000567393 USP10Q14694 798 aaKnown RBP12.8□□□□□ -0.36
NEIL1-213ENST00000567393 PHKG1Q16816 387 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 DEFB110Q30KQ9 67 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 ZC3H12BQ5HYM0 836 aaKnown RBP12.8□□□□□ -0.36
NEIL1-213ENST00000567393 KIAA1614Q5VZ46 1190 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 TLDC1Q6P9B6 456 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 FIGLAQ6QHK4 219 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 SUSD1Q6UWL2 747 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 FAM20CQ8IXL6 584 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 LRFN5Q96NI6 719 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 CYTH2Q99418 400 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 MIPEPQ99797 713 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 PCBD2Q9H0N5 130 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 GPAMQ9HCL2 828 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 CCDC177Q9NQR7 707 aaPredicted RBP12.8□□□□□ -0.36
NEIL1-213ENST00000567393 UTP6Q9NYH9 597 aaKnown RBP12.8□□□□□ -0.36
NEIL1-213ENST00000567393 EURLQ9NYK6 297 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 STOX2Q9P2F5 926 aaPredicted RBP12.8□□□□□ -0.36
NEIL1-213ENST00000567393 TAC3Q9UHF0 121 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 PADI1Q9ULC6 663 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 NOVA2Q9UNW9 492 aaKnown RBP12.8□□□□□ -0.36
NEIL1-213ENST00000567393 KLHL20Q9Y2M5 609 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 MTO1Q9Y2Z2 717 aaKnown RBP12.8□□□□□ -0.36
NEIL1-213ENST00000567393 AP1M2Q9Y6Q5 423 aa12.8□□□□□ -0.36
NEIL1-213ENST00000567393 ASPMQ8IZT6 3477 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 DMXL2Q8TDJ6 3036 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 TEX51A0A1B0GUA7 166 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 RHOXF2BP0C7M4 288 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 LIFP15018 202 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 STMN1P16949 149 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 CCND1P24385 295 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 PGGT1BP53609 377 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 PRDX1Q06830 199 aaKnown RBP12.79□□□□□ -0.36
NEIL1-213ENST00000567393 SRSF6Q13247 344 aaKnown RBP12.79□□□□□ -0.36
NEIL1-213ENST00000567393 ZNF460Q14592 562 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 SLMAPQ14BN4 828 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 THEMIS2Q5TEJ8 643 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 ARHGAP40Q5TG30 622 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 ICE2Q659A1 982 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 FCRL6Q6DN72 434 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 MCATQ8IVS2 390 aaKnown RBP12.79□□□□□ -0.36
NEIL1-213ENST00000567393 CEP97Q8IW35 865 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 LRRC56Q8IYG6 542 aaPredicted RBP12.79□□□□□ -0.36
NEIL1-213ENST00000567393 ATL1Q8WXF7 558 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 RHOXF2Q9BQY4 288 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 ACAT2Q9BWD1 397 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 FUT8Q9BYC5 575 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 FAM117AQ9C073 453 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 SLC7A5P2Q9GIP4 190 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 CDC42EP4Q9H3Q1 356 aaKnown RBP12.79□□□□□ -0.36
NEIL1-213ENST00000567393 ACSS3Q9H6R3 686 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 ACTR5Q9H9F9 607 aaPredicted RBP12.79□□□□□ -0.36
NEIL1-213ENST00000567393 MRPS30Q9NP92 439 aaKnown RBP12.79□□□□□ -0.36
NEIL1-213ENST00000567393 LHX9Q9NQ69 397 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 IRAK4Q9NWZ3 460 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 ARL15Q9NXU5 204 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 SRPK3Q9UPE1 567 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 PCDHGA4Q9Y5G9 962 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 CACNA1BQ00975 2339 aa12.79□□□□□ -0.36
NEIL1-213ENST00000567393 AHCTF1Q8WYP5 2266 aa12.78□□□□□ -0.36
NEIL1-213ENST00000567393 LOC101059948A0A1B0GTJ6 334 aa12.78□□□□□ -0.36
NEIL1-213ENST00000567393 OR2A25A4D2G3 310 aa12.78□□□□□ -0.36
NEIL1-213ENST00000567393 C21orf140B9A014 251 aa12.78□□□□□ -0.36
NEIL1-213ENST00000567393 ZSCAN9O15535 394 aaPredicted RBP12.78□□□□□ -0.36
NEIL1-213ENST00000567393 ZNF749O43361 778 aa12.78□□□□□ -0.36
NEIL1-213ENST00000567393 ZNF500O60304 480 aaPredicted RBP12.78□□□□□ -0.36
NEIL1-213ENST00000567393 WISP3O95389 354 aaPredicted RBP12.78□□□□□ -0.36
NEIL1-213ENST00000567393 KLK3P07288 261 aaPredicted RBP12.78□□□□□ -0.36
NEIL1-213ENST00000567393 RAB10P61026 200 aa12.78□□□□□ -0.36
NEIL1-213ENST00000567393 TBPL1P62380 186 aa12.78□□□□□ -0.36
NEIL1-213ENST00000567393 GPS2Q13227 327 aa12.78□□□□□ -0.36
NEIL1-213ENST00000567393 EFTUD2Q15029 972 aaKnown RBP eCLIP12.78□□□□□ -0.36
NEIL1-213ENST00000567393 ZKSCAN8Q15776 578 aaPredicted RBP12.78□□□□□ -0.36
NEIL1-213ENST00000567393 TCTE1Q5JU00 501 aa12.78□□□□□ -0.36
NEIL1-213ENST00000567393 PRAMEF13Q5VWM6 474 aa12.78□□□□□ -0.36
NEIL1-213ENST00000567393 AGTRAPQ6RW13 159 aa12.78□□□□□ -0.36
NEIL1-213ENST00000567393 SBSNQ6UWP8 590 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms