RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 CD97P48960 835 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 FNTAP49354 379 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 CLCN7P51798 805 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 ARSFP54793 590 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 RRADP55042 308 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 VSX2P58304 361 aaPredicted RBP9.61□□□□□ -0.87
CMTM3-209ENST00000565003 CTBP1Q13363 440 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 THOC5Q13769 683 aaKnown RBP9.61□□□□□ -0.87
CMTM3-209ENST00000565003 SSPNQ14714 243 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 FRMPD2BQ6IN97 320 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 COX15Q7KZN9 410 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 PPP1R32Q7Z5V6 425 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 RAB42Q8N4Z0 105 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 DTWD1Q8N5C7 304 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 METTL27Q8N6F8 245 aaPredicted RBP9.61□□□□□ -0.87
CMTM3-209ENST00000565003 NAT8LQ8N9F0 302 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 OR9A1PQ8NGU1 263 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 MAGEC3Q8TD91 643 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 ACTRT1Q8TDG2 376 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 ZDHHC19Q8WVZ1 309 aaPredicted RBP9.61□□□□□ -0.87
CMTM3-209ENST00000565003 DLG3Q92796 817 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 ZUFSPQ96AP4 578 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 NAP1L3Q99457 506 aaPredicted RBP9.61□□□□□ -0.87
CMTM3-209ENST00000565003 SMAD5Q99717 465 aaKnown RBP9.61□□□□□ -0.87
CMTM3-209ENST00000565003 SELENOSQ9BQE4 189 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 ACAT2Q9BWD1 397 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 KCNF1Q9H3M0 494 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 SLC6A20Q9NP91 592 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 FBXO6Q9NRD1 293 aaPredicted RBP9.61□□□□□ -0.87
CMTM3-209ENST00000565003 ENAMQ9NRM1 1142 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 CUTCQ9NTM9 273 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 INTS10Q9NVR2 710 aaKnown RBP9.61□□□□□ -0.87
CMTM3-209ENST00000565003 P4HTMQ9NXG6 502 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 GPR83Q9NYM4 423 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 SPATA7Q9P0W8 599 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 LUZP4Q9P127 313 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 SNX12Q9UMY4 172 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 ZNF451Q9Y4E5 1061 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 KLK4Q9Y5K2 254 aa9.61□□□□□ -0.87
CMTM3-209ENST00000565003 ANKRD12Q6UB98 2062 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 LOC105369274A0A096LPK9 316 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 LOC102723532A0A0G2JNH3 316 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 A0A0J9YVX5 310 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 MAGEB16A2A368 324 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 OR2A25A4D2G3 310 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 CTAGE9A4FU28 777 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 FITM1A5D6W6 292 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 CLEC18AA5D8T8 446 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 TTLL8A6PVC2 850 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 DSCR3O14972 297 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 MED26O95402 600 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 ONECUT2O95948 504 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 MPP1Q00013 466 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 SRSF1Q07955 248 aaKnown RBP eCLIP9.6□□□□□ -0.87
CMTM3-209ENST00000565003 CUL1Q13616 776 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 GRM7Q14831 915 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 LONRF1Q17RB8 773 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 TCTE1Q5JU00 501 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 DCAF10Q5QP82 559 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 WASHC2DQ5SRD0 308 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 RNASEH2BQ5TBB1 312 aaKnown RBP9.6□□□□□ -0.87
CMTM3-209ENST00000565003 YOD1Q5VVQ6 348 aaPredicted RBP9.6□□□□□ -0.87
CMTM3-209ENST00000565003 ZNF549Q6P9A3 640 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 SUSD1Q6UWL2 747 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 CLEC18BQ6UXF7 455 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 RNF44Q7L0R7 432 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 OR4N4Q8N0Y3 316 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 RBMXL3Q8N7X1 1067 aaKnown RBP9.6□□□□□ -0.87
CMTM3-209ENST00000565003 Q8NA96 180 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 CLEC18CQ8NCF0 446 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 KCNJ9Q92806 393 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 FKBP10Q96AY3 582 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 PTERQ96BW5 349 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 SIGLEC10Q96LC7 697 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 IP6K3Q96PC2 410 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 PKP4Q99569 1192 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 SPSB2Q99619 263 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 DPH7Q9BTV6 452 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 MFRPQ9BY79 579 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 SYNPO2LQ9H987 977 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 GRPEL1Q9HAV7 217 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 TRMT1Q9NXH9 659 aaKnown RBP9.6□□□□□ -0.87
CMTM3-209ENST00000565003 STOX2Q9P2F5 926 aaPredicted RBP9.6□□□□□ -0.87
CMTM3-209ENST00000565003 CTSFQ9UBX1 484 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 G3BP2Q9UN86 482 aaKnown RBP9.6□□□□□ -0.87
CMTM3-209ENST00000565003 VPS9D1Q9Y2B5 631 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 PCDHGB7Q9Y5F8 929 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 MAD1L1Q9Y6D9 718 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 PCM1Q15154 2024 aa9.6□□□□□ -0.87
CMTM3-209ENST00000565003 IGKV1-8A0A0C4DH67 115 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 GOLGA6L10A0A0M3HER8 536 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 PEX12O00623 359 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 DPM1O60762 260 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 ALOX12BO75342 701 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 BANF1O75531 89 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 CATP04040 527 aaKnown RBP9.59□□□□□ -0.87
CMTM3-209ENST00000565003 CD63P08962 238 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 CMPK1P30085 196 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 OR1D4P47884 311 aa9.59□□□□□ -0.87
CMTM3-209ENST00000565003 UQCRFS1P47985 274 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms