RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 OR2A1Q8NGT9 310 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 PWWP2AQ96N64 755 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 PKP4Q99569 1192 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 NDNQ99608 321 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 EBNA1BP2Q99848 306 aaKnown RBP19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 SELENOSQ9BQE4 189 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 TRIM51Q9BSJ1 452 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 AARSD1Q9BTE6 412 aaKnown RBP19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 DHRS4Q9BTZ2 278 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 ACAT2Q9BWD1 397 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 ING2Q9H160 280 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 EPN3Q9H201 632 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 ACSS2Q9NR19 701 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 FAM114A2Q9NRY5 505 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 IFT80Q9P2H3 777 aaPredicted RBP19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 GPN3Q9UHW5 284 aaPredicted RBP19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 PADI2Q9Y2J8 665 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 SAR1BQ9Y6B6 198 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 MED13Q9UHV7 2174 aa19.16■□□□□ 0.66
SHCBP1-203ENST00000564272 CNOT3O75175 753 aaKnown RBP19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 KLF7O75840 302 aaPredicted RBP19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 ITGAXP20702 1163 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 OTX2P32243 289 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 DR1Q01658 176 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 TLE1Q04724 770 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 TSTA3Q13630 321 aaPredicted RBP19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 ATP1A4Q13733 1029 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 NKAIN1Q4KMZ8 207 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 ZC3H12BQ5HYM0 836 aaKnown RBP19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 SUSD1Q6UWL2 747 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 TTLL10Q6ZVT0 673 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 ASB18Q6ZVZ8 466 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 NEK10Q6ZWH5 1172 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 TMEM151BQ8IW70 566 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 CPNE9Q8IYJ1 553 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 C2CD4AQ8NCU7 369 aaPredicted RBP19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 DLG3Q92796 817 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 ZUFSPQ96AP4 578 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 C17orf62Q9BQA9 187 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 SLC6A20Q9NP91 592 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 KLHL42Q9P2K6 505 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 SLC17A6Q9P2U8 582 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 NDOR1Q9UHB4 597 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 DHRS7Q9Y394 339 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 TNRC6AQ8NDV7 1962 aaKnown RBP19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 CCDC88CQ9P219 2028 aa19.15■□□□□ 0.66
SHCBP1-203ENST00000564272 TARM1B6A8C7 271 aa19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 WISP1O95388 367 aa19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 ALAS2P22557 587 aa19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 CCL11P51671 97 aa19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 SPANXN3Q5MJ09 141 aa19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 HP1BP3Q5SSJ5 553 aaPredicted RBP19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 PIWIL4Q7Z3Z4 852 aaKnown RBP19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 PPFIBP2Q8ND30 876 aa19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 SMPDL3AQ92484 453 aa19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 INPP5DQ92835 1189 aa19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 WDR83Q9BRX9 315 aaKnown RBP19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 PLAC1Q9HBJ0 212 aa19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 SLC22A11Q9NSA0 550 aa19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 CUTCQ9NTM9 273 aa19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 ANAPC2Q9UJX6 822 aa19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 CHMP2BQ9UQN3 213 aa19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 PTRH2Q9Y3E5 179 aaKnown RBP19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 KLK4Q9Y5K2 254 aa19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 COMMD10Q9Y6G5 202 aa19.14■□□□□ 0.65
SHCBP1-203ENST00000564272 A0A0J9YVX5 310 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 A0A1B0GX78 115 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 TTI1O43156 1089 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 VPS26AO75436 327 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 TTC4O95801 387 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 SYF2O95926 243 aaKnown RBP19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 MPC1LP0DKB6 136 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 ENO3P13929 434 aaPredicted RBP19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 CMPK1P30085 196 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 RPA3P35244 121 aaPredicted RBP19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 CASRP41180 1078 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 FOLR3P41439 243 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 PNLIPRP1P54315 467 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 VSX2P58304 361 aaPredicted RBP19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 MORF4L2Q15014 288 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 FRMPD2BQ6IN97 320 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 SYDE1Q6ZW31 735 aaPredicted RBP19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 MRGPREQ86SM8 312 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 RAB43Q86YS6 212 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 DTWD1Q8N5C7 304 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 ASB11Q8WXH4 323 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 CFAP36Q96G28 342 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 ZNF285Q96NJ3 590 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 DPH7Q9BTV6 452 aa19.13■□□□□ 0.65
SHCBP1-203ENST00000564272 LOC105369274A0A096LPK9 316 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 LOC102723532A0A0G2JNH3 316 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 OR2A25A4D2G3 310 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 SLC16A8O95907 504 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 GABRB3P28472 473 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 ELK3P41970 407 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 ITGA8P53708 1063 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 ARSFP54793 590 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 TIAL1Q01085 375 aaKnown RBP eCLIP19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 KLRB1Q12918 225 aa19.12■□□□□ 0.65
SHCBP1-203ENST00000564272 GRM7Q14831 915 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms