RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 GPR156Q8NFN8 814 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 OR4C6Q8NH72 309 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 AGR3Q8TD06 166 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 SETD7Q8WTS6 366 aaKnown RBP12.4□□□□□ -0.42
CLK3-214ENST00000564096 SLC5A11Q8WWX8 675 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 ATOH1Q92858 354 aaPredicted RBP12.4□□□□□ -0.42
CLK3-214ENST00000564096 EFCAB11Q9BUY7 163 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 SLC29A3Q9BZD2 475 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 ZMYND15Q9H091 742 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 EPB41L1Q9H4G0 881 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 XKR8Q9H6D3 395 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 FSCN3Q9NQT6 498 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 ACSS2Q9NR19 701 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 MARCOQ9UEW3 520 aaPredicted RBP12.4□□□□□ -0.42
CLK3-214ENST00000564096 TAC3Q9UHF0 121 aa12.4□□□□□ -0.42
CLK3-214ENST00000564096 PIPSLA2A3N6 862 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 TRPC5OSA6NMA1 111 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 C2orf74A8MZ97 194 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 NDUFAB1O14561 156 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 AZIN1O14977 448 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 NUDT21O43809 227 aaKnown RBP12.39□□□□□ -0.43
CLK3-214ENST00000564096 CLDN9O95484 217 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 CHRM5P08912 532 aaPredicted RBP12.39□□□□□ -0.43
CLK3-214ENST00000564096 HGFP14210 728 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 TSPAN8P19075 237 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 DRD4P21917 467 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 HRH2P25021 359 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 CMPK1P30085 196 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 HMOX2P30519 316 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 CCR10P46092 362 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 PPM1FP49593 454 aaPredicted RBP12.39□□□□□ -0.43
CLK3-214ENST00000564096 IRF8Q02556 426 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 TCF15Q12870 199 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 BNIP3Q12983 259 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 TRAF3Q13114 568 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 FASTKQ14296 549 aaKnown RBP12.39□□□□□ -0.43
CLK3-214ENST00000564096 NR0B2Q15466 257 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 XKR6Q5GH73 641 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 PLA2G2CQ5R387 149 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.39□□□□□ -0.43
CLK3-214ENST00000564096 C10orf62Q5T681 223 aaPredicted RBP12.39□□□□□ -0.43
CLK3-214ENST00000564096 GKAP1Q5VSY0 366 aaPredicted RBP12.39□□□□□ -0.43
CLK3-214ENST00000564096 CES4AQ5XG92 561 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 KANK2Q63ZY3 851 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 SUSD1Q6UWL2 747 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 SPATA21Q7Z572 469 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 MILR1Q7Z6M3 343 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 C17orf82Q86X59 251 aaPredicted RBP12.39□□□□□ -0.43
CLK3-214ENST00000564096 LRRC56Q8IYG6 542 aaPredicted RBP12.39□□□□□ -0.43
CLK3-214ENST00000564096 CLYBLQ8N0X4 340 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 LSMEM2Q8N112 164 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 MINDY1Q8N5J2 469 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 TBC1D19Q8N5T2 526 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 LINC01555Q8NAE3 123 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 OR4E2Q8NGC2 313 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 OR52B6Q8NGF0 335 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 OR10G6Q8NH81 332 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 CCT6BQ92526 530 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 UBE2E3Q969T4 207 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 REPS1Q96D71 796 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 PTCD3Q96EY7 689 aaKnown RBP12.39□□□□□ -0.43
CLK3-214ENST00000564096 NTMT1Q9BV86 223 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 SHCBP1LQ9BZQ2 653 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 EHD1Q9H4M9 534 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 PELI2Q9HAT8 420 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 ZBTB26Q9HCK0 441 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 PRM3Q9NNZ6 103 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 NPHS2Q9NP85 383 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 KLHL14Q9P2G3 628 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 NCDNQ9UBB6 729 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 PCDHGB2Q9Y5G2 931 aa12.39□□□□□ -0.43
CLK3-214ENST00000564096 GSAPA4D1B5 854 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 OR5K3A6NET4 321 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 ISM1B1AKI9 464 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 E7EQ34 232 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 OR7A17O14581 309 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 HDAC3O15379 428 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 FOXD2O60548 495 aaPredicted RBP12.38□□□□□ -0.43
CLK3-214ENST00000564096 LRP3O75074 770 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 KRT6AP02538 564 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 KRT6BP04259 564 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 KITP10721 976 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 UROSP10746 265 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 CXCR2P25025 360 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 ARRB2P32121 409 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 HNF4AP41235 474 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 CAPZBP47756 277 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 KRT6CP48668 564 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 SH3BP2P78314 561 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 PHEXP78562 749 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 GABPB1Q06547 395 aaPredicted RBP12.38□□□□□ -0.43
CLK3-214ENST00000564096 PCDH1Q08174 1060 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 CHIT1Q13231 466 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 LAPTM5Q13571 262 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 TBCCQ15814 346 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 HIST2H2ACQ16777 129 aaPredicted RBP12.38□□□□□ -0.43
CLK3-214ENST00000564096 LIPJQ5W064 366 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 ICE2Q659A1 982 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 ATG9BQ674R7 924 aa12.38□□□□□ -0.43
CLK3-214ENST00000564096 HIST2H2AA3Q6FI13 130 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms