RNA–Protein interactions for RNA: ENST00000563513.1

FANCA-212, Transcript of FA complementation group A, humanhuman

TSL 4

Gene FANCA, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-212ENST00000563513 DHRS13Q6UX07 377 aa18.06■□□□□ 0.48
FANCA-212ENST00000563513 ZYG11AQ6WRX3 759 aa18.06■□□□□ 0.48
FANCA-212ENST00000563513 FBXO39Q8N4B4 442 aa18.06■□□□□ 0.48
FANCA-212ENST00000563513 PTGR2Q8N8N7 351 aaPredicted RBP18.06■□□□□ 0.48
FANCA-212ENST00000563513 ARMC2Q8NEN0 867 aa18.06■□□□□ 0.48
FANCA-212ENST00000563513 UBTD2Q8WUN7 234 aa18.06■□□□□ 0.48
FANCA-212ENST00000563513 PHF21BQ96EK2 531 aa18.06■□□□□ 0.48
FANCA-212ENST00000563513 PKNOX2Q96KN3 472 aa18.06■□□□□ 0.48
FANCA-212ENST00000563513 TGM7Q96PF1 710 aa18.06■□□□□ 0.48
FANCA-212ENST00000563513 CD244Q9BZW8 370 aa18.06■□□□□ 0.48
FANCA-212ENST00000563513 SEMA6CQ9H3T2 930 aa18.06■□□□□ 0.48
FANCA-212ENST00000563513 SH2B3Q9UQQ2 575 aa18.06■□□□□ 0.48
FANCA-212ENST00000563513 SLC22A14Q9Y267 594 aa18.06■□□□□ 0.48
FANCA-212ENST00000563513 CNOT1A5YKK6 2376 aaKnown RBP18.05■□□□□ 0.48
FANCA-212ENST00000563513 PCM1Q15154 2024 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 D6RAR5 112 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 STX16-NPEPL1H3BU86 382 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 MATN2O00339 956 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 STX16O14662 325 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 SMIM24O75264 130 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 SIX3O95343 332 aaPredicted RBP18.05■□□□□ 0.48
FANCA-212ENST00000563513 S100BP04271 92 aaPredicted RBP18.05■□□□□ 0.48
FANCA-212ENST00000563513 ATP5F1P24539 256 aaPredicted RBP18.05■□□□□ 0.48
FANCA-212ENST00000563513 PDX1P52945 283 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 NFKB2Q00653 900 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 ZFP36L1Q07352 338 aaKnown RBP18.05■□□□□ 0.48
FANCA-212ENST00000563513 PCBP2Q15366 365 aaKnown RBP eCLIP18.05■□□□□ 0.48
FANCA-212ENST00000563513 CAPN13Q6MZZ7 669 aaPredicted RBP18.05■□□□□ 0.48
FANCA-212ENST00000563513 ARMC6Q6NXE6 501 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 SPESP1Q6UW49 350 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 FAM92BQ6ZTR7 304 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 TRIM73Q86UV7 250 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 THOC6Q86W42 341 aaKnown RBP18.05■□□□□ 0.48
FANCA-212ENST00000563513 PLXDC1Q8IUK5 500 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 SLITRK4Q8IW52 837 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 OR4D9Q8NGE8 314 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 WDR48Q8TAF3 677 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 SLC22A18Q96BI1 424 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 MED8Q96G25 268 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 ZDHHC12Q96GR4 267 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 MAP3K3Q99759 626 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 ACAT2Q9BWD1 397 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 PITPNM3Q9BZ71 974 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 IQCGQ9H095 443 aaKnown RBP18.05■□□□□ 0.48
FANCA-212ENST00000563513 ACBD3Q9H3P7 528 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 SYNDIG1Q9H7V2 258 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 KCNK9Q9NPC2 374 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 CCDC177Q9NQR7 707 aaPredicted RBP18.05■□□□□ 0.48
FANCA-212ENST00000563513 WWOXQ9NZC7 414 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 SEMA5BQ9P283 1151 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 COPG2Q9UBF2 871 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 TMCO1Q9UM00 188 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 PCDHB11Q9Y5F2 797 aa18.05■□□□□ 0.48
FANCA-212ENST00000563513 IGHV5-10-1A0A0J9YXX1 117 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 STK16O75716 305 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 CDK4P11802 303 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 CPA3P15088 417 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 EPORP19235 508 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 TAC1P20366 129 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 PPM1FP49593 454 aaPredicted RBP18.04■□□□□ 0.48
FANCA-212ENST00000563513 SLC18A1P54219 525 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 PRDX1Q06830 199 aaKnown RBP18.04■□□□□ 0.48
FANCA-212ENST00000563513 TSTA3Q13630 321 aaPredicted RBP18.04■□□□□ 0.48
FANCA-212ENST00000563513 SPIDRQ14159 915 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 SF1Q15637 639 aaKnown RBP18.04■□□□□ 0.48
FANCA-212ENST00000563513 SLC5A12Q1EHB4 618 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 KIAA1614Q5VZ46 1190 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 LCTLQ6UWM7 567 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 B3GNT8Q7Z7M8 397 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 GOLGA6L1Q8N7Z2 621 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 OR2L3Q8NG85 312 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 RDH11Q8TC12 318 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 MOCOSQ96EN8 888 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 DPYSL5Q9BPU6 564 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 ABCF3Q9NUQ8 709 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 TAC3Q9UHF0 121 aa18.04■□□□□ 0.48
FANCA-212ENST00000563513 APOBEC2Q9Y235 224 aaKnown RBP18.04■□□□□ 0.48
FANCA-212ENST00000563513 IGHV5-51A0A0C4DH38 117 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 IGKV1-8A0A0C4DH67 115 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 TMEM120BA0PK00 339 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 HMGB1P1B2RPK0 211 aaPredicted RBP18.03■□□□□ 0.48
FANCA-212ENST00000563513 PRAMEF10O60809 474 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 IPO13O94829 963 aaKnown RBP18.03■□□□□ 0.48
FANCA-212ENST00000563513 WDR47O94967 919 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 DHRS4L1P0CG22 281 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 THRAP10827 490 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 MYL2P10916 166 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 PVRP15151 417 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 CCND1P24385 295 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 HOXD11P31277 338 aaPredicted RBP18.03■□□□□ 0.48
FANCA-212ENST00000563513 PRKAA2P54646 552 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 PCLAFQ15004 111 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 PRAMEF13Q5VWM6 474 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 ICE2Q659A1 982 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 ARHGAP22Q7Z5H3 698 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 CD180Q99467 661 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 MIPEPQ99797 713 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 C1QTNF3Q9BXJ4 246 aa18.03■□□□□ 0.48
FANCA-212ENST00000563513 CNOT10Q9H9A5 744 aaKnown RBP18.03■□□□□ 0.48
FANCA-212ENST00000563513 SLC6A20Q9NP91 592 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms