RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 ATG13O75143 517 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 MFN2O95140 757 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 CXCL10P02778 98 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 YES1P07947 543 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 ZCCHC18P0CG32 403 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 CALCBP10092 127 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 NEFHP12036 1026 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 CCDC130P13994 396 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 RPA2P15927 270 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 ITGB8P26012 769 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 HOXA7P31268 230 aaPredicted RBP5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 BMI1P35226 326 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 ETV4P43268 484 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 MMP13P45452 471 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 AGTR2P50052 363 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 CNN1P51911 297 aaKnown RBP5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 OAZ1P54368 228 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 DYNLL1P63167 89 aaKnown RBP5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 RAE1P78406 368 aaKnown RBP5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 TNK1Q13470 666 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 TP53BP2Q13625 1128 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 KRT33BQ14525 404 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 USP10Q14694 798 aaKnown RBP5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 CCL15Q16663 113 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 ST3GAL2Q16842 350 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 PLEKHN1Q494U1 663 aaPredicted RBP5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 BCL7AQ4VC05 210 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 SOWAHCQ53LP3 525 aaPredicted RBP5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 ASPRV1Q53RT3 343 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 C9orf50Q5SZB4 431 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 ARHGEF16Q5VV41 709 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 AP1ARQ63HQ0 302 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 FBXO46Q6PJ61 603 aaPredicted RBP5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 OLFML1Q6UWY5 402 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 SLC39A5Q6ZMH5 540 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 TMEM26Q6ZUK4 368 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 DOK3Q7L591 496 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 DET1Q7L5Y6 550 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 ZNF551Q7Z340 670 aaPredicted RBP5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 MYOCDQ8IZQ8 938 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 OR9A1PQ8NGU1 263 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 OR14K1Q8NGZ2 314 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 GPT2Q8TD30 523 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 STARD8Q92502 1023 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 CTHRC1Q96CG8 243 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 MAGED4Q96JG8 741 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 COQ10AQ96MF6 247 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 MUS81Q96NY9 551 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 ZNF559Q9BR84 538 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 GTPBP2Q9BX10 602 aaKnown RBP5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 SYNDIG1Q9H7V2 258 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 RAB9BQ9NP90 201 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 FARSBQ9NSD9 589 aaKnown RBP5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 BARHL2Q9NY43 387 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 COMMD3-BMI1R4GMX3 469 aa5.05□□□□□ -1.6
VPS35P1-201ENST00000563400 AK9Q5TCS8 1911 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 MYH13Q9UKX3 1938 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 TIAM2Q8IVF5 1701 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 OR14I1A6ND48 311 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 DDTLA6NHG4 134 aaPredicted RBP5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 LGALS8O00214 317 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 MEIS2O14770 477 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 ANKRD28O15084 1053 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 HOXA3O43365 443 aaPredicted RBP5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 PEX10O60683 326 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 B4GALT2O60909 372 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 ECI2O75521 394 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 POP4O95707 220 aaKnown RBP5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 GH2P01242 217 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 MBPP02686 304 aaPredicted RBP5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 HOXB9P17482 250 aaPredicted RBP5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 DDX5P17844 614 aaKnown RBP5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 GLDCP23378 1020 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 ABCG1P45844 678 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 SLC6A12P48065 614 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 GPR143P51810 404 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 CDR1P51861 262 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 CHN2P52757 468 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 JAG1P78504 1218 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 TMEM62Q0P6H9 643 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 PPP1R8Q12972 351 aaKnown RBP5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 SRSF5Q13243 272 aaKnown RBP5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 GAB1Q13480 694 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 VGLL4Q14135 290 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 NR1I3Q14994 352 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 KCNA10Q16322 511 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 PDK4Q16654 411 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 CLPPQ16740 277 aaPredicted RBP5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 ME3Q16798 604 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 KRTAP19-4Q3LI73 84 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 FAM98BQ52LJ0 330 aaKnown RBP5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 RABL3Q5HYI8 236 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 DCAF12L2Q5VW00 463 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 PRAMEF7Q5VXH5 474 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 CYB5D1Q6P9G0 228 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 LCTLQ6UWM7 567 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 ZNF813Q6ZN06 617 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 NOXA1Q86UR1 476 aa5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 TP53I13Q8NBR0 393 aaPredicted RBP5.04□□□□□ -1.6
VPS35P1-201ENST00000563400 GPRC5AQ8NFJ5 357 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms