RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 CDRT15Q96T59 188 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 RTP3Q9BQQ7 232 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 IDI2Q9BXS1 227 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 PKIBQ9C010 78 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 CTDSP1Q9GZU7 261 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 TMEM185BQ9H7F4 350 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 KCNMB3Q9NPA1 279 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 CCNB1IP1Q9NPC3 277 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 NKIRAS1Q9NYS0 192 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 CLEC2DQ9UHP7 191 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 TMEM184BQ9Y519 407 aaPredicted RBP4.64□□□□□ -1.67
SMG1-207ENST00000563235 KLK4Q9Y5K2 254 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 TEX13CA0A0J9YWL9 993 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 PLSCR5A0PG75 271 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 GAGE10A6NGK3 116 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 YDJCA8MPS7 323 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 A8MXQ7 604 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 M0QYT0 321 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 NRP2O60462 931 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 SUPT3HO75486 399 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 CNTN5O94779 1100 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 SNAPINO95295 136 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 KRT16P08779 473 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 SPATA31D3P0C874 917 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 TATP17735 454 aaPredicted RBP4.64□□□□□ -1.67
SMG1-207ENST00000563235 CDH2P19022 906 aaPredicted RBP4.64□□□□□ -1.67
SMG1-207ENST00000563235 CD72P21854 359 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 PAICSP22234 425 aaKnown RBP4.64□□□□□ -1.67
SMG1-207ENST00000563235 NAMPTP43490 491 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 KLC1Q07866 573 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 RAB32Q13637 225 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 NR1D2Q14995 579 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 PCOLCEQ15113 449 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 DLG2Q15700 870 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 ME3Q16798 604 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 PRAMEF5Q5TYX0 476 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 GPR157Q5UAW9 335 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 PRAMEF9Q5VWM5 478 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 PRAMEF6Q5VXH4 476 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 LIPNQ5VXI9 398 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 SPOPLQ6IQ16 392 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 RGS7BPQ6MZT1 257 aaPredicted RBP4.64□□□□□ -1.67
SMG1-207ENST00000563235 SPATA31D4Q6ZUB0 917 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 KCTD8Q6ZWB6 473 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 LINC00523Q86TU6 105 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 PLA2G4DQ86XP0 818 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 AQP12AQ8IXF9 295 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 MB21D2Q8IYB1 491 aaPredicted RBP4.64□□□□□ -1.67
SMG1-207ENST00000563235 ABI1Q8IZP0 508 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 GRHL3Q8TE85 626 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 GPX8Q8TED1 209 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 BSCL2Q96G97 398 aaPredicted RBP4.64□□□□□ -1.67
SMG1-207ENST00000563235 PBKQ96KB5 322 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 CYP2S1Q96SQ9 504 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.64□□□□□ -1.67
SMG1-207ENST00000563235 POLDIP3Q9BY77 421 aaKnown RBP4.64□□□□□ -1.67
SMG1-207ENST00000563235 BCL2L14Q9BZR8 327 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 ROPN1BQ9BZX4 212 aaPredicted RBP4.64□□□□□ -1.67
SMG1-207ENST00000563235 SIRPDQ9H106 197 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 NAPBQ9H115 298 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 UBQLN3Q9H347 655 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 GREM2Q9H772 168 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 LNPEPQ9UIQ6 1025 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 ADAM21Q9UKJ8 722 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 GINS2Q9Y248 185 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 ERGIC3Q9Y282 383 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 SLC5A6Q9Y289 635 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 PIK3C2BO00750 1634 aa4.64□□□□□ -1.67
SMG1-207ENST00000563235 FRMPD4Q14CM0 1322 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 PNMA6EA0A0J9YXQ4 647 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 A0A0J9YYE9 177 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 A0A1B0GVM2 712 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 PRSS29PA6NIE9 313 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 MARCH11A6NNE9 402 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 SUV39H1O43463 412 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 ATP9AO75110 1047 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 RHOBTB1O94844 696 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 TRBC1P01850 177 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 CAPN1P07384 714 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 C1SP09871 688 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 CEACAM1P13688 526 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 B4GALT1P15291 398 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 MMP8P22894 467 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 PPP2R1AP30153 589 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 ARRB1P49407 418 aaPredicted RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 CDH13P55290 713 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 RAB11AP62491 216 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 MAT1AQ00266 395 aaKnown RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 RAB11BQ15907 218 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 AP5B1Q2VPB7 878 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 PLAG1Q6DJT9 500 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 NAPEPLDQ6IQ20 393 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 MRNIPQ6NTE8 343 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 GPAT2Q6NUI2 795 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 RIPOR1Q6ZS17 1223 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 LHFPL4Q7Z7J7 247 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 MRPL41Q8IXM3 137 aaKnown RBP4.63□□□□□ -1.67
SMG1-207ENST00000563235 LILRA2Q8N149 483 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 GHDCQ8N2G8 530 aa4.63□□□□□ -1.67
SMG1-207ENST00000563235 STKLD1Q8NE28 680 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms