RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 KIAA0895Q8NCT3 520 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 NEK11Q8NG66 645 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 SSMEM1Q8WWF3 244 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 DNASE1L2Q92874 299 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 RIT1Q92963 219 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 TEKT1Q969V4 418 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 ARSGQ96EG1 525 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 RAD9AQ99638 391 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 EGFL8Q99944 293 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 MLPHQ9BV36 600 aaPredicted RBP3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 TRMT61BQ9BVS5 477 aaKnown RBP3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 PRRG4Q9BZD6 226 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 MMP28Q9H239 520 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 TRPV4Q9HBA0 871 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 DNAJC4Q9NNZ3 241 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 ZFP57Q9NU63 452 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 FETUBQ9UGM5 382 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 CDH7Q9ULB5 785 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 GRIP1Q9Y3R0 1128 aa3.03□□□□□ -1.92
SHCBP1-202ENST00000563219 A0A087WV48 116 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 FAM172BPA6NC97 362 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 NEMP2A6NFY4 417 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 YDJCA8MPS7 323 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 PRR32B1ATL7 298 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 P2RY10O00398 339 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 SLC33A1O00400 549 aaPredicted RBP3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 PRKNO60260 465 aaPredicted RBP3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 PRAF2O60831 178 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 BAG2O95816 211 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 CRYAAP02489 173 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 H1F0P07305 194 aaKnown RBP3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 STAG3L1P0CL83 205 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 HAPLN1P10915 354 aaPredicted RBP3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 PAX1P15863 534 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 HLA-DPA1P20036 260 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 NR1D1P20393 614 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 CCND3P30281 292 aaPredicted RBP3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 CTNNB1P35222 781 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 SERPINB6P35237 376 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 SOAT1P35610 550 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 NR2C2P49116 596 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 ALDH3A2P51648 485 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 ADARP55265 1226 aaKnown RBP3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 ST8SIA6P61647 398 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 MBTD1Q05BQ5 628 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 RPA4Q13156 261 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 CBX3Q13185 183 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 MFAP5Q13361 173 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 TNK1Q13470 666 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 NONOQ15233 471 aaKnown RBP eCLIP3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 PKN2Q16513 984 aaKnown RBP3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 SPOUT1Q5T280 376 aaKnown RBP3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 GRTP1Q5TC63 336 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 CYB5D1Q6P9G0 228 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 FAM43BQ6ZT52 329 aaPredicted RBP3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 CCDC83Q8IWF9 413 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 PEX5LQ8IYB4 626 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 NDUFAF2Q8N183 169 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 CIARTQ8N365 385 aaPredicted RBP3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 SLC24A4Q8NFF2 622 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 DMBX1Q8NFW5 382 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 OR11H4Q8NGC9 324 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 OR13J1Q8NGT2 312 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 CCDC47Q96A33 483 aaKnown RBP3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 CDHR1Q96JP9 859 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 ZNF583Q96ND8 569 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 TMEM237Q96Q45 408 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 TMEM206Q9H813 350 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 PELI2Q9HAT8 420 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 CDH20Q9HBT6 801 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 APOBEC3GQ9HC16 384 aaKnown RBP3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 TUFT1Q9NNX1 390 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 MID1IP1Q9NPA3 183 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 TCF7L2Q9NQB0 619 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 B3GAT1Q9P2W7 334 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 CACNG4Q9UBN1 327 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 DAPK2Q9UIK4 370 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 MOSPD1Q9UJG1 213 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 ODF2LQ9ULJ1 636 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 KNSTRNQ9Y448 316 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 HBS1LQ9Y450 684 aaKnown RBP3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 JRKLQ9Y4A0 524 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 PCDHGA1Q9Y5H4 931 aa3.02□□□□□ -1.93
SHCBP1-202ENST00000563219 PCDH11YQ9BZA8 1340 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 MED19A0JLT2 244 aaPredicted RBP3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 SYCE3A1L190 88 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 DUXAA6NLW8 204 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 LINC01565O15544 149 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 TTI1O43156 1089 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 FGF17O60258 216 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 FCGR3BO75015 233 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 CRCPO75575 148 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 PLGP00747 810 aaPredicted RBP3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 IGLV2-11P01706 119 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 ATP1A1P05023 1023 aaKnown RBP3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 UROSP10746 265 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 STMN1P16949 149 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 CD27P26842 260 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 EPHA2P29317 976 aa3.01□□□□□ -1.93
SHCBP1-202ENST00000563219 DCTP40126 519 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms