RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 FRMPD3Q5JV73 1810 aa18.18■□□□□ 0.5
BBS4-204ENST00000562084 ANKRD12Q6UB98 2062 aa18.18■□□□□ 0.5
BBS4-204ENST00000562084 C2orf81A6NN90 581 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 CENPXA8MT69 81 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 M0R082 166 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 CAPN5O15484 640 aaPredicted RBP18.17■□□□□ 0.5
BBS4-204ENST00000562084 RAMP2O60895 175 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 SEMG1P04279 462 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 GTF2E2P29084 291 aaKnown RBP18.17■□□□□ 0.5
BBS4-204ENST00000562084 PXNP49023 591 aaPredicted RBP18.17■□□□□ 0.5
BBS4-204ENST00000562084 IL1RL1Q01638 556 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 FPGSQ05932 587 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.17■□□□□ 0.5
BBS4-204ENST00000562084 NPRL3Q12980 569 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 GTF2H3Q13889 308 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 GALNT3Q14435 633 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 PTGR1Q14914 329 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 ZFP69Q49AA0 526 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 ERICH5Q6P6B1 374 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 TMC5Q6UXY8 1006 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 RNF19BQ6ZMZ0 732 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 SERPINA11Q86U17 422 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 CCDC190Q86UF4 302 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 LIX1Q8N485 282 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 SIDT2Q8NBJ9 832 aaKnown RBP18.17■□□□□ 0.5
BBS4-204ENST00000562084 DNAJB3Q8WWF6 145 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 CRELD1Q96HD1 420 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 HRASLS5Q96KN8 279 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 FKBP14Q9NWM8 211 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 PDP1Q9P0J1 537 aaPredicted RBP18.17■□□□□ 0.5
BBS4-204ENST00000562084 CRNNQ9UBG3 495 aaPredicted RBP18.17■□□□□ 0.5
BBS4-204ENST00000562084 ARIH1Q9Y4X5 557 aaPredicted RBP18.17■□□□□ 0.5
BBS4-204ENST00000562084 AP1M2Q9Y6Q5 423 aa18.17■□□□□ 0.5
BBS4-204ENST00000562084 FAM25AB3EWG3 89 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 FAM25CB3EWG5 89 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 FAM25GB3EWG6 89 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 PRAMEF11O60813 436 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 DUSP11O75319 330 aaKnown RBP18.16■□□□□ 0.5
BBS4-204ENST00000562084 KRT6AP02538 564 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 ESR1P03372 595 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 KRT6BP04259 564 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 IGFBP6P24592 240 aaPredicted RBP18.16■□□□□ 0.5
BBS4-204ENST00000562084 TIE1P35590 1138 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 LIMK1P53667 647 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 UGT2B15P54855 530 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 RPP38P78345 283 aaKnown RBP18.16■□□□□ 0.5
BBS4-204ENST00000562084 SMN1Q16637 294 aaKnown RBP18.16■□□□□ 0.5
BBS4-204ENST00000562084 TIMM50Q3ZCQ8 353 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 INO80DQ53TQ3 878 aaPredicted RBP18.16■□□□□ 0.5
BBS4-204ENST00000562084 STK40Q8N2I9 435 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 ST13P5Q8NFI4 369 aaPredicted RBP18.16■□□□□ 0.5
BBS4-204ENST00000562084 ESAMQ96AP7 390 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 RNF208Q9H0X6 261 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 IPPKQ9H8X2 491 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 LRTM1Q9HBL6 345 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 PAK6Q9NQU5 681 aaPredicted RBP18.16■□□□□ 0.5
BBS4-204ENST00000562084 FBXL12Q9NXK8 326 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 CFL2Q9Y281 166 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 DOCK4Q8N1I0 1966 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 A0A075B6Q4 140 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 TNFRSF10BO14763 440 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 UGT2B17O75795 530 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 GLUD1P00367 558 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 F2P00734 622 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 CDK1P06493 297 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 HOXB9P17482 250 aaPredicted RBP18.16■□□□□ 0.5
BBS4-204ENST00000562084 TGFBR1P36897 503 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 PIK3CBP42338 1070 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 MAPKAPK2P49137 400 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 ITGA1P56199 1179 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 MRPS15P82914 257 aaKnown RBP18.16■□□□□ 0.5
BBS4-204ENST00000562084 SYT16Q17RD7 645 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 MS4A13Q5J8X5 152 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 COL13A1Q5TAT6 717 aaPredicted RBP18.16■□□□□ 0.5
BBS4-204ENST00000562084 LHX8Q68G74 356 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 TLK2Q86UE8 772 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 PHACTR4Q8IZ21 702 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 ATG16L2Q8NAA4 619 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 APH1BQ8WW43 257 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 COL21A1Q96P44 957 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 REEP1Q9H902 201 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 TRPS1Q9UHF7 1281 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 PCDHGB2Q9Y5G2 931 aa18.16■□□□□ 0.5
BBS4-204ENST00000562084 DRGXA6NNA5 263 aa18.15■□□□□ 0.5
BBS4-204ENST00000562084 MYO1GB0I1T2 1018 aa18.15■□□□□ 0.5
BBS4-204ENST00000562084 E5RI56 91 aa18.15■□□□□ 0.5
BBS4-204ENST00000562084 TPD52L2O43399 206 aaKnown RBP18.15■□□□□ 0.5
BBS4-204ENST00000562084 CNPP09543 421 aaKnown RBP18.15■□□□□ 0.5
BBS4-204ENST00000562084 PTGER3P43115 390 aa18.15■□□□□ 0.5
BBS4-204ENST00000562084 SLC15A1P46059 708 aa18.15■□□□□ 0.5
BBS4-204ENST00000562084 TBX4P57082 545 aa18.15■□□□□ 0.5
BBS4-204ENST00000562084 GNG2P59768 71 aa18.15■□□□□ 0.5
BBS4-204ENST00000562084 ABRQ12979 859 aa18.15■□□□□ 0.5
BBS4-204ENST00000562084 E2F2Q14209 437 aa18.15■□□□□ 0.5
BBS4-204ENST00000562084 EIF4HQ15056 248 aaKnown RBP18.15■□□□□ 0.5
BBS4-204ENST00000562084 TIGD5Q53EQ6 642 aa18.15■□□□□ 0.5
BBS4-204ENST00000562084 CTSL3PQ5NE16 218 aa18.15■□□□□ 0.5
BBS4-204ENST00000562084 GLT6D1Q7Z4J2 308 aa18.15■□□□□ 0.5
BBS4-204ENST00000562084 ENTHD1Q8IYW4 607 aa18.15■□□□□ 0.5
BBS4-204ENST00000562084 DCBLD1Q8N8Z6 715 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms