RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 LYSMD4Q5XG99 296 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 NCR3LG1Q68D85 454 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ZNF787Q6DD87 383 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 PRR27Q6MZM9 219 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 FUT10Q6P4F1 479 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 KCTD18Q6PI47 426 aaPredicted RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 ZNF474Q6S9Z5 364 aaPredicted RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 CD164L2Q6UWJ8 174 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 NAPRTQ6XQN6 538 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ZNF813Q6ZN06 617 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 TMPRSS11FQ6ZWK6 438 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 EIF3MQ7L2H7 374 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 SLC29A4Q7RTT9 530 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SLC16A9Q7RTY1 509 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 TMPRSS9Q7Z410 1059 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 TRMT11Q7Z4G4 463 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 COMMD2Q86X83 199 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 FAM131BQ86XD5 332 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ZSWIM9Q86XI8 627 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SYT12Q8IV01 421 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 GPR135Q8IZ08 494 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SYCE1Q8N0S2 351 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 FUKQ8N0W3 1084 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 TCAIMQ8N3R3 496 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 GALNT16Q8N428 558 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SPATA6LQ8N4H0 392 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 PAQR4Q8N4S7 273 aaPredicted RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 DCLK2Q8N568 766 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ANKRD13CQ8N6S4 541 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 LRRC17Q8N6Y2 441 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 BCORP1Q8N888 145 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 LRRC57Q8N9N7 239 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 BOLLQ8N9W6 283 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 L3MBTL4Q8NA19 623 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 NOA1Q8NC60 698 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 CSNK2A3Q8NEV1 391 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 BBS1Q8NFJ9 593 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 STEAP2Q8NFT2 490 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 CMASQ8NFW8 434 aaPredicted RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 OR52N4Q8NGI2 321 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 OR2T34Q8NGX1 318 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 OR2AJ1Q8NGZ0 328 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 BBS10Q8TAM1 723 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 GOLGA5Q8TBA6 731 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 MYCBPAPQ8TBZ2 947 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 RNASE8Q8TDE3 154 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 HDAC7Q8WUI4 952 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 CCDC107Q8WV48 283 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 HAS2Q92819 552 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 GGHQ92820 318 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 PEX13Q92968 403 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 MCUR1Q96AQ8 359 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SLCO4A1Q96BD0 722 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 PYCR2Q96C36 320 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 C11orf24Q96F05 449 aaPredicted RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 C16orf58Q96GQ5 468 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 OXNAD1Q96HP4 312 aaPredicted RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 PBKQ96KB5 322 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ZNF582Q96NG8 517 aaPredicted RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 NECTIN4Q96NY8 510 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 BTBD9Q96Q07 612 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 PSKH2Q96QS6 385 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 MYADMQ96S97 322 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ZNF347Q96SE7 839 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SECISBP2Q96T21 854 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 OLFM1Q99784 485 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 KXD1Q9BQD3 176 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ZNF577Q9BSK1 485 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 UBAC1Q9BSL1 405 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 FSD1LQ9BXM9 530 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 GPR61Q9BZJ8 451 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 MIS12Q9H081 205 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 TSPYL1Q9H0U9 437 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 RIOX1Q9H6W3 641 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 DCLRE1BQ9H816 532 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 VCPKMTQ9H867 229 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 AGO3Q9H9G7 860 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 CPNE5Q9HCH3 593 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 RAB9BQ9NP90 201 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 DUSP22Q9NRW4 184 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 CYSLTR2Q9NS75 346 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 MBNL3Q9NUK0 354 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 TMEM184CQ9NVA4 438 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 MRPL22Q9NWU5 206 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 ANKRD10Q9NXR5 420 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 BARHL2Q9NY43 387 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 PKD2L2Q9NZM6 624 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 CNOT2Q9NZN8 540 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 ERVK-18Q9QC07 812 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ATXN10Q9UBB4 475 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SUN2Q9UH99 717 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 SLC12A6Q9UHW9 1150 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 KIAA1257Q9ULG3 409 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 ABT1Q9ULW3 272 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 PLCL2Q9UPR0 1127 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 MRPS33Q9Y291 106 aaKnown RBP1.97□□□□□ -2.09
RTF1-207ENST00000561076 NME7Q9Y5B8 376 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 AP4B1Q9Y6B7 739 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 WNT6Q9Y6F9 365 aa1.97□□□□□ -2.09
RTF1-207ENST00000561076 OAS3Q9Y6K5 1087 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms