RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 HBQ1P09105 142 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 PKMP14618 531 aaKnown RBP15.33■□□□□ 0.04
LMX1B-204ENST00000561065 MCM3P25205 808 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 SKIV2L2P42285 1042 aaKnown RBP15.33■□□□□ 0.04
LMX1B-204ENST00000561065 ARL4CP56559 192 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 YBX1P67809 324 aaKnown RBP15.33■□□□□ 0.04
LMX1B-204ENST00000561065 CALCOCO2Q13137 446 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 SPANXN3Q5MJ09 141 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 ZNF470Q6ECI4 717 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 DTWD1Q8N5C7 304 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 GIMAP7Q8NHV1 300 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 PROKR1Q8TCW9 393 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 EBNA1BP2Q99848 306 aaKnown RBP15.33■□□□□ 0.04
LMX1B-204ENST00000561065 INTS7Q9NVH2 962 aaKnown RBP15.33■□□□□ 0.04
LMX1B-204ENST00000561065 AP1M2Q9Y6Q5 423 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 SHANK1Q9Y566 2161 aa15.33■□□□□ 0.04
LMX1B-204ENST00000561065 DOPEY2Q9Y3R5 2298 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 MDC1Q14676 2089 aaKnown RBP15.32■□□□□ 0.04
LMX1B-204ENST00000561065 FAM187AA6NFU0 413 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 ARHGEF33A8MVX0 844 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 EFCAB8A8MWE9 144 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 CTSVO60911 334 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 FKBP9O95302 570 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 ATP5DP30049 168 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 GRIA3P42263 894 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 CCL11P51671 97 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 FASTKQ14296 549 aaKnown RBP15.32■□□□□ 0.04
LMX1B-204ENST00000561065 ACSBG2Q5FVE4 666 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 MRGPREQ86SM8 312 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 DENND6AQ8IWF6 608 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 HMGCLL1Q8TB92 370 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 KRT12Q99456 494 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 DHRS4Q9BTZ2 278 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 SLC25A23Q9BV35 468 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 NUDT9Q9BW91 350 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 ACSS2Q9NR19 701 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 FAM114A2Q9NRY5 505 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 SRPK3Q9UPE1 567 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 PLAAQ9Y263 795 aa15.32■□□□□ 0.04
LMX1B-204ENST00000561065 PCDHGA9Q9Y5G4 932 aaKnown RBP15.32■□□□□ 0.04
LMX1B-204ENST00000561065 ZNF839A8K0R7 811 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 MASP2O00187 686 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 MED26O95402 600 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 MATN4O95460 622 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 UMODP07911 640 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 ERGP11308 486 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 AGXTP21549 392 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 OTX2P32243 289 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 HSD17B2P37059 387 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 MLLT10P55197 1068 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 NAA25Q14CX7 972 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 HIF1AQ16665 826 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 BBS9Q3SYG4 887 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 MLIPQ5VWP3 458 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 LRRC8EQ6NSJ5 796 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 MRPL14Q6P1L8 145 aaKnown RBP15.31■□□□□ 0.04
LMX1B-204ENST00000561065 ZNF549Q6P9A3 640 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 TLDC1Q6P9B6 456 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 FIGLAQ6QHK4 219 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 SYT10Q6XYQ8 523 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 KIAA0408Q6ZU52 694 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 MCATQ8IVS2 390 aaKnown RBP15.31■□□□□ 0.04
LMX1B-204ENST00000561065 FDCSPQ8NFU4 85 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 MIB2Q96AX9 1013 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 ZNF285Q96NJ3 590 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 MIPEPQ99797 713 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 SYNPO2LQ9H987 977 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 PPANQ9NQ55 473 aaKnown RBP15.31■□□□□ 0.04
LMX1B-204ENST00000561065 FBXO6Q9NRD1 293 aaPredicted RBP15.31■□□□□ 0.04
LMX1B-204ENST00000561065 IRAK4Q9NWZ3 460 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 FBXO5Q9UKT4 447 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 PADI2Q9Y2J8 665 aa15.31■□□□□ 0.04
LMX1B-204ENST00000561065 UTP11Q9Y3A2 253 aaKnown RBP15.31■□□□□ 0.04
LMX1B-204ENST00000561065 CYSRT1A8MQ03 144 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 TTI1O43156 1089 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 VPS26AO75436 327 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 ENO3P13929 434 aaPredicted RBP15.3■□□□□ 0.04
LMX1B-204ENST00000561065 SLC1A2P43004 574 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 CLCN7P51798 805 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 PGDP52209 483 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 DCDP81605 110 aaKnown RBP15.3■□□□□ 0.04
LMX1B-204ENST00000561065 CKAP4Q07065 602 aaKnown RBP15.3■□□□□ 0.04
LMX1B-204ENST00000561065 CTBP1Q13363 440 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 SF1Q15637 639 aaKnown RBP15.3■□□□□ 0.04
LMX1B-204ENST00000561065 NADK2Q4G0N4 442 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 NKAIN1Q4KMZ8 207 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 HSP90AA5PQ58FG0 334 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 NEK10Q6ZWH5 1172 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 COX15Q7KZN9 410 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 KCNMB4Q86W47 210 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 PALM2Q8IXS6 379 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 TEX19Q8NA77 164 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 SPATA4Q8NEY3 305 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 OR2L3Q8NG85 312 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 OR2A1Q8NGT9 310 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.3■□□□□ 0.04
LMX1B-204ENST00000561065 KCNJ9Q92806 393 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 RAB17Q9H0T7 212 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 SLC6A20Q9NP91 592 aa15.3■□□□□ 0.04
LMX1B-204ENST00000561065 ENAMQ9NRM1 1142 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms