RNA–Protein interactions for RNA: ENST00000561059.5

PSME1-208, Transcript of proteasome activator subunit 1, human

TSL 2

Gene PSME1, Length 947 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSME1-208	ENST00000561059	CCDC89	Q8N998	374 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	GSDMB	Q8TAX9	411 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	DENND1A	Q8TEH3	1009 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	C8orf44	Q96CB5	159 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	ACAT2	Q9BWD1	397 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	TSSK1B	Q9BXA7	367 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	ZC3H7B	Q9UGR2	993 aa	Known RBP	12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	ANAPC5	Q9UJX4	755 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059	GUCA1B	Q9UMX6	200 aa		12.82	□□□□□ -0.36
PSME1-208	ENST00000561059		F8W8V4	182 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	PRICKLE3	O43900	615 aa	Predicted RBP	12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	NDUFS3	O75489	264 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	IPO13	O94829	963 aa	Known RBP	12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	C1orf105	O95561	183 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	DDAH2	O95865	285 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	CD63	P08962	238 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	VARS	P26640	1264 aa	Known RBP	12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	FMO4	P31512	558 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	DCT	P40126	519 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	TSTA3	Q13630	321 aa	Predicted RBP	12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	GRM7	Q14831	915 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	ZC3H12B	Q5HYM0	836 aa	Known RBP	12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	AARS2	Q5JTZ9	985 aa	Known RBP	12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	CTSL3P	Q5NE16	218 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	GAS2L3	Q86XJ1	694 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	PIAS4	Q8N2W9	510 aa	Predicted RBP	12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	TTC29	Q8NA56	475 aa	Predicted RBP	12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	CATSPER1	Q8NEC5	780 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	DNAJB14	Q8TBM8	379 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	UBE2Q2	Q8WVN8	375 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	TM9SF4	Q92544	642 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	FKBP10	Q96AY3	582 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	SLC22A18	Q96BI1	424 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	THOC3	Q96J01	351 aa	Known RBP	12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	C5orf34	Q96MH7	638 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	WDR77	Q9BQA1	342 aa	Predicted RBP	12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	CRB3	Q9BUF7	120 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	P2RY12	Q9H244	342 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	SYNPO2L	Q9H987	977 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	INTS7	Q9NVH2	962 aa	Known RBP	12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	RIMKLB	Q9ULI2	386 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059	SLC5A6	Q9Y289	635 aa		12.81	□□□□□ -0.36
PSME1-208	ENST00000561059		A0A1W2PPV9	198 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	NIPSNAP2	O75323	286 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	F10	P00742	488 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	MGAT1	P26572	445 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	PPARG	P37231	505 aa	Predicted RBP	12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	SOX8	P57073	446 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	BASP1	P80723	227 aa	Known RBP	12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	SRSF11	Q05519	484 aa	Known RBP	12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	KLC1	Q07866	573 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	CDC16	Q13042	620 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	SIX1	Q15475	284 aa	Predicted RBP	12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	TUBB8	Q3ZCM7	444 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	PCID2	Q5JVF3	399 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	AGAP7P	Q5VUJ5	663 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	TTC23L	Q6PF05	361 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	NLRP9	Q7RTR0	991 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	OTOA	Q7RTW8	1153 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	OR2L3	Q8NG85	312 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	OR11G2	Q8NGC1	345 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	GRHL3	Q8TE85	626 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	AGAP4	Q96P64	663 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	TRIM56	Q9BRZ2	755 aa	Known RBP	12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	WDR54	Q9H977	334 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	ZNF160	Q9HCG1	818 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	TREX1	Q9NSU2	369 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	ABCF3	Q9NUQ8	709 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	SYBU	Q9NX95	663 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	IL1RAPL1	Q9NZN1	696 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	PAK5	Q9P286	719 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	GALP	Q9UBC7	116 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	GNPTG	Q9UJJ9	305 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	OSGIN2	Q9Y236	505 aa		12.8	□□□□□ -0.36
PSME1-208	ENST00000561059	CREBBP	Q92793	2442 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	TCRBV7S3A2	A0A539	114 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	HYKK	A2RU49	373 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	WIPF3	A6NGB9	483 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	KLHL18	O94889	574 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	VAPB	O95292	243 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	ALB	P02768	609 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	STATH	P02808	62 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	PIM1	P11309	404 aa	Predicted RBP	12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	ARNT	P27540	789 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	KCNJ1	P48048	391 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	TTPA	P49638	278 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	TRIP13	Q15645	432 aa	Predicted RBP	12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	VWA2	Q5GFL6	755 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	TCTE1	Q5JU00	501 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	IRAK1BP1	Q5VVH5	260 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	FAAH2	Q6GMR7	532 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	SUSD1	Q6UWL2	747 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	LAPTM4B	Q86VI4	370 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	KCNMB4	Q86W47	210 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	STT3B	Q8TCJ2	826 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	RAD51AP1	Q96B01	352 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	MFSD3	Q96ES6	412 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	ZNF285	Q96NJ3	590 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	PANX3	Q96QZ0	392 aa		12.79	□□□□□ -0.36
PSME1-208	ENST00000561059	YIPF2	Q9BWQ6	316 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms