RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 C5AR2Q9P296 337 aa13.1□□□□□ -0.31
SMAD3-214ENST00000560402 FETUBQ9UGM5 382 aa13.1□□□□□ -0.31
SMAD3-214ENST00000560402 ICKQ9UPZ9 632 aa13.1□□□□□ -0.31
SMAD3-214ENST00000560402 ASF1AQ9Y294 204 aa13.1□□□□□ -0.31
SMAD3-214ENST00000560402 MAP4K5Q9Y4K4 846 aa13.1□□□□□ -0.31
SMAD3-214ENST00000560402 ESPL1Q14674 2120 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 A0A0J9YY10 115 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 BLACEA4D250 179 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 ERI2A8K979 691 aaKnown RBP13.09□□□□□ -0.31
SMAD3-214ENST00000560402 E7ESA3 106 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 GOLGA8MH3BSY2 632 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 AP3B1O00203 1094 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 ZNF749O43361 778 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 APRTP07741 180 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 OR56A5P0C7T3 313 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 PVRP15151 417 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 UGT2B7P16662 529 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 STX2P32856 288 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 CDKN1CP49918 316 aaPredicted RBP13.09□□□□□ -0.31
SMAD3-214ENST00000560402 GNGT1P63211 74 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 CBLBQ13191 982 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 KCTD19Q17RG1 926 aaPredicted RBP13.09□□□□□ -0.31
SMAD3-214ENST00000560402 PTCHD3Q3KNS1 767 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 NADK2Q4G0N4 442 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 VWA5B1Q5TIE3 1220 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 LCN10Q6JVE6 187 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 RHBDD2Q6NTF9 364 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 PIANPQ8IYJ0 282 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 ZBTB2Q8N680 514 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 CLDN19Q8N6F1 224 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 PHC3Q8NDX5 983 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 FDCSPQ8NFU4 85 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 OR5AR1Q8NGP9 310 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 OR5K2Q8NHB8 316 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 EPS8L3Q8TE67 593 aaKnown RBP13.09□□□□□ -0.31
SMAD3-214ENST00000560402 ELMO1Q92556 727 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 PNPLA2Q96AD5 504 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 TLCD1Q96CP7 247 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 SMAD5Q99717 465 aaKnown RBP13.09□□□□□ -0.31
SMAD3-214ENST00000560402 LRRC4CQ9HCJ2 640 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 CUEDC1Q9NWM3 386 aaPredicted RBP13.09□□□□□ -0.31
SMAD3-214ENST00000560402 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.09□□□□□ -0.31
SMAD3-214ENST00000560402 SENP1Q9P0U3 644 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 LGALS13Q9UHV8 139 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 RIMKLBQ9ULI2 386 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 IKBKGQ9Y6K9 419 aa13.09□□□□□ -0.31
SMAD3-214ENST00000560402 SLC5A10A0PJK1 596 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 MROH6A6NGR9 719 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 H3BMH7 237 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 ZSCAN9O15535 394 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-214ENST00000560402 SHOX2O60902 331 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-214ENST00000560402 OR2B3O76000 313 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 AGFG2O95081 481 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 METTL18O95568 372 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 CHRM5P08912 532 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-214ENST00000560402 PRSS56P0CW18 603 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 MLNP12872 115 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 ACADLP28330 430 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 FOXN2P32314 431 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 FOLR3P41439 243 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 UQCRFS1P47985 274 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 CDH17Q12864 832 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 PRKG2Q13237 762 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 ATP1A4Q13733 1029 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 KIR2DS3Q14952 304 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 RASA2Q15283 850 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 SLC5A12Q1EHB4 618 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 JMJD6Q6NYC1 403 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-214ENST00000560402 TLDC1Q6P9B6 456 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 AFTPHQ6ULP2 937 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 MRGPREQ86SM8 312 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 TDRPQ86YL5 185 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 FER1L6-AS2Q96M78 137 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 SELENOSQ9BQE4 189 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 NUDT9Q9BW91 350 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 TSSK1BQ9BXA7 367 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 XKR8Q9H6D3 395 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 SLAMF7Q9NQ25 335 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 TXLNGQ9NUQ3 528 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 NDOR1Q9UHB4 597 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 GPN3Q9UHW5 284 aaPredicted RBP13.08□□□□□ -0.32
SMAD3-214ENST00000560402 ANKRD12Q6UB98 2062 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 ICE1Q9Y2F5 2266 aa13.08□□□□□ -0.32
SMAD3-214ENST00000560402 CCDC78A2IDD5 438 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 HEATR9A2RTY3 570 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 IPO13O94829 963 aaKnown RBP13.07□□□□□ -0.32
SMAD3-214ENST00000560402 RPN2P04844 631 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 ALPPP05187 535 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 GNLYP22749 145 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 PPARGP37231 505 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-214ENST00000560402 MDH1P40925 334 aaKnown RBP13.07□□□□□ -0.32
SMAD3-214ENST00000560402 SLCO1A2P46721 670 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 GABRA4P48169 554 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 SSPNQ14714 243 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 INPP5JQ15735 1006 aaPredicted RBP13.07□□□□□ -0.32
SMAD3-214ENST00000560402 LONRF1Q17RB8 773 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 ANKRD22Q5VYY1 191 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 SLC6A19Q695T7 634 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 UNC5AQ6ZN44 842 aa13.07□□□□□ -0.32
SMAD3-214ENST00000560402 ANKMY2Q8IV38 441 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms