RNA–Protein interactions for RNA: ENST00000560163.1

RABGGTA-214, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-214ENST00000560163 ZUFSPQ96AP4 578 aa18.84■□□□□ 0.61
RABGGTA-214ENST00000560163 SPOCK3Q9BQ16 436 aa18.84■□□□□ 0.61
RABGGTA-214ENST00000560163 TBL1YQ9BQ87 522 aa18.84■□□□□ 0.61
RABGGTA-214ENST00000560163 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.84■□□□□ 0.61
RABGGTA-214ENST00000560163 FEZ2Q9UHY8 353 aaPredicted RBP18.84■□□□□ 0.61
RABGGTA-214ENST00000560163 IGHV1-45A0A0A0MS14 117 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 HYKKA2RU49 373 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 TARM1B6A8C7 271 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 SPOPO43791 374 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 ZRANB2O95218 330 aaKnown RBP eCLIP18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 CLDN14O95500 239 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 SMSP52788 366 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 VSX2P58304 361 aaPredicted RBP18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 DNAJC21Q5F1R6 531 aaKnown RBP18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 FRMPD2BQ6IN97 320 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 PRMT9Q6P2P2 845 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 BBS12Q6ZW61 710 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 KATNAL2Q8IYT4 538 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 RCOR2Q8IZ40 523 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 AMER2Q8N7J2 671 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 OR2L8Q8NGY9 312 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 DNAJC7Q99615 494 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 ENKD1Q9H0I2 346 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 INTS7Q9NVH2 962 aaKnown RBP18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 TINAGQ9UJW2 476 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 KLK4Q9Y5K2 254 aa18.83■□□□□ 0.6
RABGGTA-214ENST00000560163 ZNF469Q96JG9 3925 aaPredicted RBP18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 H7C0C1 242 aa18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 APOC4-APOC2K7ER74 178 aa18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 PRAMEF2O60811 474 aa18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 APOC2P02655 101 aa18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 ATP5OP48047 213 aa18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 PRPSAP1Q14558 356 aa18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 SF1Q15637 639 aaKnown RBP18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 HIBCHQ6NVY1 386 aaPredicted RBP18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 Q6ZPB1 254 aaPredicted RBP18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 VRK3Q8IV63 474 aa18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 SLC22A15Q8IZD6 547 aa18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 IL17FQ96PD4 163 aa18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 TREX2Q9BQ50 279 aaPredicted RBP18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 MCCC2Q9HCC0 563 aa18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 CIDEBQ9UHD4 219 aa18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 ALG6Q9Y672 507 aa18.82■□□□□ 0.6
RABGGTA-214ENST00000560163 LOC105369274A0A096LPK9 316 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 LOC102723532A0A0G2JNH3 316 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 OR5H15A6NDH6 313 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 IDSB3KWA1 339 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 AKR1B10O60218 316 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 WFS1O76024 890 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 FKBP9O95302 570 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 ITGAMP11215 1152 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 CASP6P55212 293 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 PMP22Q01453 160 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 SYTL3Q4VX76 610 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 KCTD11Q693B1 232 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 CNSTQ6PJW8 725 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 ARHGEF18Q6ZSZ5 1173 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 TAX1BP1Q86VP1 789 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 OR4N4Q8N0Y3 316 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 STYXQ8WUJ0 223 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 HEMGNQ9BXL5 484 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 SPTLC3Q9NUV7 552 aa18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 ZC3H7BQ9UGR2 993 aaKnown RBP18.81■□□□□ 0.6
RABGGTA-214ENST00000560163 NAV3Q8IVL0 2385 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 LOC102723996A0A087X1L8 192 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 GPC4O75487 556 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 MBD3O95983 291 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 OR56A5P0C7T3 313 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 ESRRAP11474 423 aaPredicted RBP18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 TPH1P17752 444 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 CCR7P32248 378 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 MARCKSL1P49006 195 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 EMP2P54851 167 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 TLE4Q04727 773 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 EEF1A2Q05639 463 aaKnown RBP18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 CEP97Q8IW35 865 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 OR8K1Q8NGG5 319 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 THAP3Q8WTV1 239 aaPredicted RBP18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 C10orf90Q96M02 699 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 CHP1Q99653 195 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 ZNF700Q9H0M5 742 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 STOX2Q9P2F5 926 aaPredicted RBP18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 IMPACTQ9P2X3 320 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 MEMO1Q9Y316 297 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 DNHD1Q96M86 4753 aa18.8■□□□□ 0.6
RABGGTA-214ENST00000560163 MROH6A6NGR9 719 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 OR51F1A6NGY5 319 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 RASGRF2O14827 1237 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 OR1I1O60431 355 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 NRP2O60462 931 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 DIAPH2O60879 1101 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 FOXN2P32314 431 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 CSE1LP55060 971 aaKnown RBP18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 PCOLCEQ15113 449 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 LUZP1Q86V48 1076 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 SPPL2CQ8IUH8 684 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 DCUN1D3Q8IWE4 304 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 SUN3Q8TAQ9 357 aa18.79■□□□□ 0.6
RABGGTA-214ENST00000560163 ACTL9Q8TC94 416 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms