RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 DNASE1L2Q92874 299 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 EXT2Q93063 718 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 SPACA9Q96E40 222 aaPredicted RBP3.46□□□□□ -1.86
SPG11-218ENST00000559754 ZNF558Q96NG5 402 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 INPP5KQ9BT40 448 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 ABHD6Q9BV23 337 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 KRT23Q9C075 422 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 HSD3B7Q9H2F3 369 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 MAGIXQ9H6Y5 334 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 LIN28AQ9H9Z2 209 aaKnown RBP3.46□□□□□ -1.86
SPG11-218ENST00000559754 TUFT1Q9NNX1 390 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 COMMD8Q9NX08 183 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 MTMR10Q9NXD2 777 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 CYP39A1Q9NYL5 469 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 STK39Q9UEW8 545 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 TSPYL4Q9UJ04 414 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 HACL1Q9UJ83 578 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 SNX7Q9UNH6 387 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 CHKBQ9Y259 395 aa3.46□□□□□ -1.86
SPG11-218ENST00000559754 SYNJ2BP-COX16A0A087WUM0 186 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 A0A1B0GU03 582 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 OR5K3A6NET4 321 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 SLC9B1P1A6NJY1 282 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 MPHOSPH10O00566 681 aaKnown RBP3.45□□□□□ -1.86
SPG11-218ENST00000559754 RSL1D1O76021 490 aaKnown RBP3.45□□□□□ -1.86
SPG11-218ENST00000559754 HEXBP07686 556 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 OR52Z1P0C646 297 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 UROSP10746 265 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 VPREB1P12018 145 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 CCNA2P20248 432 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 TKTL1P51854 596 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 CDH13P55290 713 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 ST8SIA6P61647 398 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 ACSM1Q08AH1 577 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 KLHL30Q0D2K2 578 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 TRIM29Q14134 588 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 INAQ16352 499 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 WSCD2Q2TBF2 565 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 HFEQ30201 348 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 ANKDD1AQ495B1 522 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 ASPRV1Q53RT3 343 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 SHEQ5VZ18 495 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 TMEM211Q6ICI0 200 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 RAD9BQ6WBX8 426 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 MYPOPQ86VE0 399 aaPredicted RBP3.45□□□□□ -1.86
SPG11-218ENST00000559754 ZNF540Q8NDQ6 660 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 CNNM3Q8NE01 707 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 OCC1Q8TAD7 63 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 SPATA18Q8TC71 538 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 HCAR2Q8TDS4 363 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 PPP4R1Q8TF05 950 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 SLC44A1Q8WWI5 657 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 ROBO4Q8WZ75 1007 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 SYAP1Q96A49 352 aaPredicted RBP3.45□□□□□ -1.86
SPG11-218ENST00000559754 TRIM44Q96DX7 344 aaPredicted RBP3.45□□□□□ -1.86
SPG11-218ENST00000559754 EEF2KMTQ96G04 330 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 RBM18Q96H35 190 aaKnown RBP3.45□□□□□ -1.86
SPG11-218ENST00000559754 PKNOX2Q96KN3 472 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 PRAM1Q96QH2 718 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 GAL3ST4Q96RP7 486 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 ASCL2Q99929 193 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 ABCG8Q9H221 673 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 EPB41L5Q9HCM4 733 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 IARS2Q9NSE4 1012 aaKnown RBP3.45□□□□□ -1.86
SPG11-218ENST00000559754 DNAJC17Q9NVM6 304 aaKnown RBP3.45□□□□□ -1.86
SPG11-218ENST00000559754 NINJ2Q9NZG7 142 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 LARSQ9P2J5 1176 aaKnown RBP3.45□□□□□ -1.86
SPG11-218ENST00000559754 ITGA11Q9UKX5 1188 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 DUSP12Q9UNI6 340 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 RABL2BQ9UNT1 228 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 C2CD2Q9Y426 696 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 AP1M2Q9Y6Q5 423 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.45□□□□□ -1.86
SPG11-218ENST00000559754 NOTCH3Q9UM47 2321 aa3.45□□□□□ -1.86
SPG11-218ENST00000559754 A0A1W2PPI3 338 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 C1orf226A1L170 272 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 RGSL1A5PLK6 1076 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 C15orf62A8K5M9 175 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 ERI2A8K979 691 aaKnown RBP3.44□□□□□ -1.86
SPG11-218ENST00000559754 K7EPI3 171 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 SMAD9O15198 467 aaKnown RBP3.44□□□□□ -1.86
SPG11-218ENST00000559754 VEGFDO43915 354 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 PRAMEF11O60813 436 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 LETM1O95202 739 aaPredicted RBP3.44□□□□□ -1.86
SPG11-218ENST00000559754 BAG4O95429 457 aaKnown RBP3.44□□□□□ -1.86
SPG11-218ENST00000559754 GH2P01242 217 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 EEF1B2P24534 225 aaKnown RBP3.44□□□□□ -1.86
SPG11-218ENST00000559754 SLC26A5P58743 744 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 RUNX1T1Q06455 604 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 KRT33BQ14525 404 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 KIR2DS3Q14952 304 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 VWC2Q2TAL6 325 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 TECRLQ5HYJ1 363 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 FAM198BQ6UWH4 519 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 INTS8Q75QN2 995 aaKnown RBP3.44□□□□□ -1.86
SPG11-218ENST00000559754 KCTD9Q7L273 389 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 MIER3Q7Z3K6 550 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 DZIP1Q86YF9 867 aaKnown RBP3.44□□□□□ -1.86
SPG11-218ENST00000559754 C4orf19Q8IY42 314 aa3.44□□□□□ -1.86
SPG11-218ENST00000559754 TBC1D21Q8IYX1 336 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms