RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 IRGCQ6NXR0 463 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 AGTRAPQ6RW13 159 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 SPESP1Q6UW49 350 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 LRIG3Q6UXM1 1119 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 FAM92BQ6ZTR7 304 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 TAOK1Q7L7X3 1001 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 CCDC91Q7Z6B0 441 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 ADAMTSL2Q86TH1 951 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 TBC1D1Q86TI0 1168 aaPredicted RBP8.72□□□□□ -1.01
HMG20A-209ENST00000559728 TAX1BP1Q86VP1 789 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 PLXDC1Q8IUK5 500 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 RIBC1Q8N443 379 aaPredicted RBP8.72□□□□□ -1.01
HMG20A-209ENST00000559728 PDPRQ8NCN5 879 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 MAGEC3Q8TD91 643 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 MCOLN3Q8TDD5 553 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 ACMSDQ8TDX5 336 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 AHCYL2Q96HN2 611 aaKnown RBP8.72□□□□□ -1.01
HMG20A-209ENST00000559728 TRAPPC9Q96Q05 1148 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 DPYSL5Q9BPU6 564 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 ATG10Q9H0Y0 220 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 C12orf65Q9H3J6 166 aaKnown RBP8.72□□□□□ -1.01
HMG20A-209ENST00000559728 ZNF768Q9H5H4 540 aaKnown RBP8.72□□□□□ -1.01
HMG20A-209ENST00000559728 SYNDIG1Q9H7V2 258 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 SLC6A20Q9NP91 592 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 INTS7Q9NVH2 962 aaKnown RBP8.72□□□□□ -1.01
HMG20A-209ENST00000559728 KLHL3Q9UH77 587 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 PTBP2Q9UKA9 531 aaKnown RBP8.72□□□□□ -1.01
HMG20A-209ENST00000559728 TLK1Q9UKI8 766 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 KLHL20Q9Y2M5 609 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 KLK4Q9Y5K2 254 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 SPTBN2O15020 2390 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 NCOR2Q9Y618 2525 aa8.72□□□□□ -1.01
HMG20A-209ENST00000559728 GSAPA4D1B5 854 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 TLCD2A6NGC4 264 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 LRRC14BA6NHZ5 514 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 SLC9B1P1A6NJY1 282 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 A8MU76 341 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 C2orf74A8MZ97 194 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 H3BMH7 237 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 UBXN8O00124 270 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 MAP2K7O14733 419 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 TOX3O15405 576 aaPredicted RBP8.71□□□□□ -1.02
HMG20A-209ENST00000559728 ERLIN1O75477 346 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 SASH3O75995 380 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 MT-ND3P03897 115 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 CTSBP07858 339 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 FGF3P11487 239 aaPredicted RBP8.71□□□□□ -1.02
HMG20A-209ENST00000559728 HGFP14210 728 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 NPPBP16860 134 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 KRT4P19013 534 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 MAP4P27816 1152 aaKnown RBP8.71□□□□□ -1.02
HMG20A-209ENST00000559728 OAS2P29728 719 aaKnown RBP8.71□□□□□ -1.02
HMG20A-209ENST00000559728 ETV5P41161 510 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 GRIA3P42263 894 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 GDF5P43026 501 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 TBPL1P62380 186 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 SH3BP2P78314 561 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 NAE1Q13564 534 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 TRA2AQ13595 282 aaKnown RBP eCLIP8.71□□□□□ -1.02
HMG20A-209ENST00000559728 FAM83EQ2M2I3 478 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 PTCHD3Q3KNS1 767 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 TAF1BQ53T94 588 aaPredicted RBP8.71□□□□□ -1.02
HMG20A-209ENST00000559728 CDKL4Q5MAI5 379 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 SNAP47Q5SQN1 464 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 C16orf46Q6P387 395 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 TTC23LQ6PF05 361 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 EXOC3L1Q86VI1 746 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 GPSM1Q86YR5 675 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 C4orf33Q8N1A6 199 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 D2HGDHQ8N465 521 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 BANPQ8N9N5 519 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 OR2L3Q8NG85 312 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 STAG3L4Q8TBR4 150 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 SMPDL3AQ92484 453 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 PMEPA1Q969W9 287 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 ESAMQ96AP7 390 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 PYCR2Q96C36 320 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 ZDHHC12Q96GR4 267 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 LIN37Q96GY3 246 aaPredicted RBP8.71□□□□□ -1.02
HMG20A-209ENST00000559728 TMEM74Q96NL1 305 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 DEPDC7Q96QD5 511 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 CD180Q99467 661 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 MIPEPQ99797 713 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 SCNM1Q9BWG6 230 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 RAB11FIP5Q9BXF6 653 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 KLHL25Q9H0H3 589 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 NMRAL1Q9HBL8 299 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 FAM60AQ9NP50 221 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 ZNF446Q9NWS9 450 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 OCIAD1Q9NX40 245 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 MKS1Q9NXB0 559 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 ARL15Q9NXU5 204 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 XPR1Q9UBH6 696 aa8.71□□□□□ -1.02
HMG20A-209ENST00000559728 A0A0J9YY10 115 aa8.7□□□□□ -1.02
HMG20A-209ENST00000559728 CCDC189A1A4V9 331 aa8.7□□□□□ -1.02
HMG20A-209ENST00000559728 NCF1BA6NI72 391 aaPredicted RBP8.7□□□□□ -1.02
HMG20A-209ENST00000559728 NCF1CA8MVU1 366 aaPredicted RBP8.7□□□□□ -1.02
HMG20A-209ENST00000559728 ISM1B1AKI9 464 aa8.7□□□□□ -1.02
HMG20A-209ENST00000559728 G3V2L1 256 aa8.7□□□□□ -1.02
HMG20A-209ENST00000559728 MATN2O00339 956 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms