RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 SMOXQ9NWM0 555 aa9.19□□□□□ -0.94
SMAD3-211ENST00000559460 SPHK1Q9NYA1 384 aa9.19□□□□□ -0.94
SMAD3-211ENST00000559460 TRPC4Q9UBN4 977 aa9.19□□□□□ -0.94
SMAD3-211ENST00000559460 TRPS1Q9UHF7 1281 aa9.19□□□□□ -0.94
SMAD3-211ENST00000559460 POLG2Q9UHN1 485 aa9.19□□□□□ -0.94
SMAD3-211ENST00000559460 ASF1AQ9Y294 204 aa9.19□□□□□ -0.94
SMAD3-211ENST00000559460 SCINQ9Y6U3 715 aa9.19□□□□□ -0.94
SMAD3-211ENST00000559460 MAP1AP78559 2803 aaPredicted RBP9.19□□□□□ -0.94
SMAD3-211ENST00000559460 A0A1W2PQ72 361 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 HYKKA2RU49 373 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 TMCO5BA8MYB1 307 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 KCNK1O00180 336 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 WIPF1O43516 503 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 TPM2P07951 284 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 ANXA5P08758 320 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 RARAP10276 462 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 CD96P40200 585 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 SSR1P43307 286 aaKnown RBP9.18□□□□□ -0.94
SMAD3-211ENST00000559460 GCGRP47871 477 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 PRLHRP49683 370 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 DLX5P56178 289 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 VSX2P58304 361 aaPredicted RBP9.18□□□□□ -0.94
SMAD3-211ENST00000559460 SNTB1Q13884 538 aaKnown RBP9.18□□□□□ -0.94
SMAD3-211ENST00000559460 BOP1Q14137 746 aaKnown RBP9.18□□□□□ -0.94
SMAD3-211ENST00000559460 TAZQ16635 292 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 MUM1Q2TAK8 710 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 SLC25A35Q3KQZ1 300 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 CATSPEREQ5SY80 951 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 PAOXQ6QHF9 649 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 FGD2Q7Z6J4 655 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 CPAMD8Q8IZJ3 1885 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 VWA5B2Q8N398 1253 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 SLC5A8Q8N695 610 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 POGLUT1Q8NBL1 392 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 ZNF398Q8TD17 642 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 NAT14Q8WUY8 206 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 SLC22A18Q96BI1 424 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 OLFM1Q99784 485 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 AGPAT1Q99943 283 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 HACD3Q9P035 362 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 C19orf25Q9UFG5 118 aaPredicted RBP9.18□□□□□ -0.94
SMAD3-211ENST00000559460 CRLS1Q9UJA2 301 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 CDC14AQ9UNH5 594 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 SPO11Q9Y5K1 396 aa9.18□□□□□ -0.94
SMAD3-211ENST00000559460 FBN1P35555 2871 aaKnown RBP9.17□□□□□ -0.94
SMAD3-211ENST00000559460 TMEM191CA6NGB0 347 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 FIGNL2A6NMB9 653 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 GABRR3A8MPY1 467 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 FAM47E-STBD1D6RA91 191 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 SMPD2O60906 423 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 SLC25A12O75746 678 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 EIF2S1P05198 315 aaKnown RBP9.17□□□□□ -0.94
SMAD3-211ENST00000559460 CCDC172P0C7W6 258 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 C8orf89P0DMQ9 161 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 IL1R2P27930 398 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 ARSEP51690 589 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 TAS2R50P59544 299 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 RPA4Q13156 261 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 PAFAH1B3Q15102 231 aaKnown RBP9.17□□□□□ -0.94
SMAD3-211ENST00000559460 HSP90AA4PQ58FG1 418 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 CCDC183Q5T5S1 534 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 MFSD4BQ5TF39 518 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 NCBP2-AS2Q69YL0 99 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 CAPN12Q6ZSI9 719 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 LAPTM4BQ86VI4 370 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 CHERPQ8IWX8 916 aaKnown RBP9.17□□□□□ -0.94
SMAD3-211ENST00000559460 TBC1D21Q8IYX1 336 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 CIARTQ8N365 385 aaPredicted RBP9.17□□□□□ -0.94
SMAD3-211ENST00000559460 RPRMLQ8N4K4 120 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 OR5AR1Q8NGP9 310 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 BLOC1S5Q8TDH9 187 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 HEXDCQ8WVB3 486 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 CABS1Q96KC9 395 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 ATG10Q9H0Y0 220 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 GANQ9H2C0 597 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 OR52A5Q9H2C5 316 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 ASB8Q9H765 288 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 MRPL47Q9HD33 250 aaKnown RBP9.17□□□□□ -0.94
SMAD3-211ENST00000559460 CBLCQ9ULV8 474 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 KLHL20Q9Y2M5 609 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 HIVEP2P31629 2446 aa9.17□□□□□ -0.94
SMAD3-211ENST00000559460 LOC102723996A0A087X1L8 192 aa9.16□□□□□ -0.94
SMAD3-211ENST00000559460 STX7O15400 261 aaKnown RBP9.16□□□□□ -0.94
SMAD3-211ENST00000559460 BUD23O43709 281 aaKnown RBP9.16□□□□□ -0.94
SMAD3-211ENST00000559460 NME2P1O60361 137 aa9.16□□□□□ -0.94
SMAD3-211ENST00000559460 SRPX2O60687 465 aaPredicted RBP9.16□□□□□ -0.94
SMAD3-211ENST00000559460 SEC24DO94855 1032 aaPredicted RBP9.16□□□□□ -0.94
SMAD3-211ENST00000559460 TFEBP19484 476 aa9.16□□□□□ -0.94
SMAD3-211ENST00000559460 NME2P22392 152 aa9.16□□□□□ -0.94
SMAD3-211ENST00000559460 GRIA3P42263 894 aa9.16□□□□□ -0.94
SMAD3-211ENST00000559460 JAM2P57087 298 aa9.16□□□□□ -0.94
SMAD3-211ENST00000559460 MMRN1Q13201 1228 aa9.16□□□□□ -0.94
SMAD3-211ENST00000559460 FILIP1LQ4L180 1135 aa9.16□□□□□ -0.94
SMAD3-211ENST00000559460 WASHC2DQ5SRD0 308 aa9.16□□□□□ -0.94
SMAD3-211ENST00000559460 FKBP15Q5T1M5 1219 aa9.16□□□□□ -0.94
SMAD3-211ENST00000559460 B3GNT6Q6ZMB0 384 aa9.16□□□□□ -0.94
SMAD3-211ENST00000559460 KRTAP1-3Q8IUG1 177 aa9.16□□□□□ -0.94
SMAD3-211ENST00000559460 CRLF3Q8IUI8 442 aa9.16□□□□□ -0.94
SMAD3-211ENST00000559460 LRRN4Q8WUT4 740 aa9.16□□□□□ -0.94
SMAD3-211ENST00000559460 IMP4Q96G21 291 aaKnown RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms