RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 ZC3H7BQ9UGR2 993 aaKnown RBP12.1□□□□□ -0.47
LRRC28-214ENST00000559433 TRMT6Q9UJA5 497 aaKnown RBP12.1□□□□□ -0.47
LRRC28-214ENST00000559433 SNX7Q9UNH6 387 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 SRPK3Q9UPE1 567 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 MED16Q9Y2X0 877 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 DHRS7Q9Y394 339 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 KCNMB2Q9Y691 235 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 SEC16AO15027 2179 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 BSNQ9UPA5 3926 aa12.1□□□□□ -0.47
LRRC28-214ENST00000559433 ANKRD12Q6UB98 2062 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 HEATR5BQ9P2D3 2071 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 A0A1W2PPV9 198 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 EFCAB8A8MWE9 144 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 PRICKLE3O43900 615 aaPredicted RBP12.09□□□□□ -0.47
LRRC28-214ENST00000559433 RFPL1O75677 317 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 SYF2O95926 243 aaKnown RBP12.09□□□□□ -0.47
LRRC28-214ENST00000559433 CD63P08962 238 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 MPC1LP0DKB6 136 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 CBSLP0DN79 551 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 ENO3P13929 434 aaPredicted RBP12.09□□□□□ -0.47
LRRC28-214ENST00000559433 MCM3P25205 808 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 CASQ1P31415 396 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 RPA3P35244 121 aaPredicted RBP12.09□□□□□ -0.47
LRRC28-214ENST00000559433 CBSP35520 551 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 GRIA3P42263 894 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 CARSP49589 748 aaKnown RBP12.09□□□□□ -0.47
LRRC28-214ENST00000559433 NFKB2Q00653 900 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 TSTA3Q13630 321 aaPredicted RBP12.09□□□□□ -0.47
LRRC28-214ENST00000559433 FASTKQ14296 549 aaKnown RBP12.09□□□□□ -0.47
LRRC28-214ENST00000559433 NCF4Q15080 339 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 LACTB2Q53H82 288 aaPredicted RBP12.09□□□□□ -0.47
LRRC28-214ENST00000559433 ZC3H12BQ5HYM0 836 aaKnown RBP12.09□□□□□ -0.47
LRRC28-214ENST00000559433 MLIPQ5VWP3 458 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 RHBDD2Q6NTF9 364 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 UGT3A1Q6NUS8 523 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 KIAA0408Q6ZU52 694 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 PIWIL4Q7Z3Z4 852 aaKnown RBP12.09□□□□□ -0.47
LRRC28-214ENST00000559433 ANKMY2Q8IV38 441 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 MCATQ8IVS2 390 aaKnown RBP12.09□□□□□ -0.47
LRRC28-214ENST00000559433 CNTN4Q8IWV2 1026 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 CPNE9Q8IYJ1 553 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 OR2L3Q8NG85 312 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 PROKR1Q8TCW9 393 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 LRRC39Q96DD0 335 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 ABHD17AQ96GS6 310 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 PKP4Q99569 1192 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 SLC17A6Q9P2U8 582 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 DHCR7Q9UBM7 475 aaKnown RBP12.09□□□□□ -0.47
LRRC28-214ENST00000559433 G3BP2Q9UN86 482 aaKnown RBP12.09□□□□□ -0.47
LRRC28-214ENST00000559433 PADI2Q9Y2J8 665 aa12.09□□□□□ -0.47
LRRC28-214ENST00000559433 ZNF839A8K0R7 811 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 TARM1B6A8C7 271 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 NDC80O14777 642 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 SUV39H1O43463 412 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 CAPN1P07384 714 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 ERGP11308 486 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 ALAS2P22557 587 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 CMPK1P30085 196 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 HSD17B2P37059 387 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 RPL21P46778 160 aaKnown RBP12.08□□□□□ -0.48
LRRC28-214ENST00000559433 PMS2P54278 862 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 PNLIPRP1P54315 467 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 MRPS25P82663 173 aaKnown RBP12.08□□□□□ -0.48
LRRC28-214ENST00000559433 C2orf54Q08AI8 447 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 ARHGAP19Q14CB8 494 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 NAA25Q14CX7 972 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 FAM69BQ5VUD6 431 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 ZNF385CQ66K41 422 aaPredicted RBP12.08□□□□□ -0.48
LRRC28-214ENST00000559433 SUSD1Q6UWL2 747 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 TEX19Q8NA77 164 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 OR2A1Q8NGT9 310 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 ASB11Q8WXH4 323 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 SMPDL3AQ92484 453 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 DLG3Q92796 817 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 ZUFSPQ96AP4 578 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 GBP5Q96PP8 586 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 SELENOSQ9BQE4 189 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 WDR83Q9BRX9 315 aaKnown RBP12.08□□□□□ -0.48
LRRC28-214ENST00000559433 ACAT2Q9BWD1 397 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 PLAC1Q9HBJ0 212 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 ACSS2Q9NR19 701 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 TAS2R13Q9NYV9 303 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 NDOR1Q9UHB4 597 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 TCFL5Q9UL49 500 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 SNX24Q9Y343 169 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 TEX264Q9Y6I9 313 aa12.08□□□□□ -0.48
LRRC28-214ENST00000559433 MDC1Q14676 2089 aaKnown RBP12.07□□□□□ -0.48
LRRC28-214ENST00000559433 EIF3FO00303 357 aaPredicted RBP12.07□□□□□ -0.48
LRRC28-214ENST00000559433 ZBTB14O43829 449 aa12.07□□□□□ -0.48
LRRC28-214ENST00000559433 CTSVO60911 334 aa12.07□□□□□ -0.48
LRRC28-214ENST00000559433 SLC16A8O95907 504 aa12.07□□□□□ -0.48
LRRC28-214ENST00000559433 AHSGP02765 367 aa12.07□□□□□ -0.48
LRRC28-214ENST00000559433 GABRB3P28472 473 aa12.07□□□□□ -0.48
LRRC28-214ENST00000559433 SKIV2L2P42285 1042 aaKnown RBP12.07□□□□□ -0.48
LRRC28-214ENST00000559433 RGS4P49798 205 aa12.07□□□□□ -0.48
LRRC28-214ENST00000559433 CCL11P51671 97 aa12.07□□□□□ -0.48
LRRC28-214ENST00000559433 ARSFP54793 590 aa12.07□□□□□ -0.48
LRRC28-214ENST00000559433 CDKN2DP55273 166 aa12.07□□□□□ -0.48
LRRC28-214ENST00000559433 VSX2P58304 361 aaPredicted RBP12.07□□□□□ -0.48
LRRC28-214ENST00000559433 ETF1P62495 437 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms