RNA–Protein interactions for RNA: ENST00000558988.5

SPG11-213, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 3

Gene SPG11, Length 620 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-213ENST00000558988 ZDHHC20Q5W0Z9 365 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 SARM1Q6SZW1 724 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 ABRAXAS1Q6UWZ7 409 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 RAD9BQ6WBX8 426 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 TAS2R42Q7RTR8 314 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 C11orf96Q7Z7L8 435 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 TMEM135Q86UB9 458 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 PPP1R3BQ86XI6 285 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 CFAP206Q8IYR0 622 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 CCDC170Q8IYT3 715 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 ESX1Q8N693 406 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 LILRA3Q8N6C8 439 aaPredicted RBP7.14□□□□□ -1.27
SPG11-213ENST00000558988 OR13C4Q8NGS5 318 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 C9orf43Q8TAL5 461 aaPredicted RBP7.14□□□□□ -1.27
SPG11-213ENST00000558988 SLC45A3Q96JT2 553 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 PPM1MQ96MI6 270 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 MAP3K3Q99759 626 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 TBL1YQ9BQ87 522 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 ZPBPQ9BS86 351 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 DESI2Q9BSY9 194 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 KLHL25Q9H0H3 589 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 ZNF768Q9H5H4 540 aaKnown RBP7.14□□□□□ -1.27
SPG11-213ENST00000558988 UCK1Q9HA47 277 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 PDE7BQ9NP56 450 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 GEMIN8Q9NWZ8 242 aaKnown RBP7.14□□□□□ -1.27
SPG11-213ENST00000558988 SOHLH2Q9NX45 425 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.14□□□□□ -1.271e-7■□□□□ 10
SPG11-213ENST00000558988 RARRES3Q9UL19 164 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 EPN1Q9Y6I3 576 aaPredicted RBP7.14□□□□□ -1.27
SPG11-213ENST00000558988 MGAQ8IWI9 3026 aa7.14□□□□□ -1.27
SPG11-213ENST00000558988 PIPSLA2A3N6 862 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 CCDC66A2RUB6 948 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 GRID2IPA4D2P6 1211 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 SPAG6O75602 509 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 LCA5LO95447 670 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 NTRK1P04629 796 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 ANKRD34CP0C6C1 535 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 PRSS56P0CW18 603 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 PYGMP11217 842 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 RALBP11234 206 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 FOLR1P15328 257 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 POLR2CP19387 275 aaPredicted RBP7.13□□□□□ -1.27
SPG11-213ENST00000558988 ITGALP20701 1170 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 RPS18P62269 152 aaKnown RBP7.13□□□□□ -1.27
SPG11-213ENST00000558988 MC1RQ01726 317 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 TLE1Q04724 770 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 DNASE1L3Q13609 305 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 BRD3Q15059 726 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 LSM12Q3MHD2 195 aaKnown RBP7.13□□□□□ -1.27
SPG11-213ENST00000558988 PWWP2BQ6NUJ5 590 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 FAM199XQ6PEV8 388 aaPredicted RBP7.13□□□□□ -1.27
SPG11-213ENST00000558988 KLHL35Q6PF15 583 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 WASH2PQ6VEQ5 465 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 PEX26Q7Z412 305 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 PRSS42Q7Z5A4 293 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 OOSP2Q86WS3 158 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 TMEM126BQ8IUX1 230 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 FAM71DQ8N9W8 422 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 SPC24Q8NBT2 197 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 OR4E2Q8NGC2 313 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 CT55Q8WUE5 264 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 APOBEC4Q8WW27 367 aaKnown RBP7.13□□□□□ -1.27
SPG11-213ENST00000558988 LRRC45Q96CN5 670 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 DNAJC1Q96KC8 554 aaKnown RBP7.13□□□□□ -1.27
SPG11-213ENST00000558988 RMDN2Q96LZ7 410 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 SPATA13Q96N96 652 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 PTCHD1Q96NR3 888 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 CATSPER2Q96P56 530 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 RUFY1Q96T51 708 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 NRTNQ99748 197 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 HGH1Q9BTY7 390 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 EFHD1Q9BUP0 239 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 TLR10Q9BXR5 811 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 TWSG1Q9GZX9 223 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 WASH6PQ9NQA3 447 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 FGF21Q9NSA1 209 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 HRASLS2Q9NWW9 162 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 PRR13Q9NZ81 148 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 AAR2Q9Y312 384 aaKnown RBP7.13□□□□□ -1.27
SPG11-213ENST00000558988 REXO2Q9Y3B8 237 aaKnown RBP7.13□□□□□ -1.27
SPG11-213ENST00000558988 TMEM184BQ9Y519 407 aaPredicted RBP7.13□□□□□ -1.27
SPG11-213ENST00000558988 PCDHA3Q9Y5H8 950 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 PIEZO2Q9H5I5 2752 aa7.13□□□□□ -1.27
SPG11-213ENST00000558988 GCN1Q92616 2671 aaKnown RBP7.12□□□□□ -1.27
SPG11-213ENST00000558988 LOC400499M0QZD8 3231 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 A0A0U1RQJ8 604 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 GOLGA6L9A6NEM1 432 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 OR5K3A6NET4 321 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 C5orf60A6NFR6 353 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 MGAT4DA6NG13 374 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 TJP3O95049 919 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 CRTAMO95727 393 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 NELFEP18615 380 aaKnown RBP7.12□□□□□ -1.27
SPG11-213ENST00000558988 CDH3P22223 829 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 MC4RP32245 332 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 CDKN1CP49918 316 aaPredicted RBP7.12□□□□□ -1.27
SPG11-213ENST00000558988 ITGA1P56199 1179 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 CHAF1BQ13112 559 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 PRKAA1Q13131 559 aa7.12□□□□□ -1.27
SPG11-213ENST00000558988 PRKG2Q13237 762 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms