RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 A0A1B0GX78 115 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 OR2A25A4D2G3 310 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 FITM1A5D6W6 292 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 E5RI56 91 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 DNALI1O14645 258 aaPredicted RBP16.31■□□□□ 0.2
LRRC28-210ENST00000558879 NRP2O60462 931 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 CD63P08962 238 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 CHRM3P20309 590 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 FOLR3P41439 243 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 ARSFP54793 590 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 CTBP1Q13363 440 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 PTK6Q13882 451 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 FASTKQ14296 549 aaKnown RBP16.31■□□□□ 0.2
LRRC28-210ENST00000558879 SSPNQ14714 243 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 LONRF1Q17RB8 773 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 TCTE1Q5JU00 501 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 COLEC12Q5KU26 742 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 YOD1Q5VVQ6 348 aaPredicted RBP16.31■□□□□ 0.2
LRRC28-210ENST00000558879 FBXO15Q8NCQ5 510 aaPredicted RBP16.31■□□□□ 0.2
LRRC28-210ENST00000558879 OR9A1PQ8NGU1 263 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 IP6K3Q96PC2 410 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 MIPEPQ99797 713 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 DDX47Q9H0S4 455 aaKnown RBP16.31■□□□□ 0.2
LRRC28-210ENST00000558879 IFT80Q9P2H3 777 aaPredicted RBP16.31■□□□□ 0.2
LRRC28-210ENST00000558879 NDOR1Q9UHB4 597 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 TSR3Q9UJK0 312 aaKnown RBP16.31■□□□□ 0.2
LRRC28-210ENST00000558879 PCDHGB7Q9Y5F8 929 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 FAM169AQ9Y6X4 670 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 FLNCQ14315 2725 aa16.31■□□□□ 0.2
LRRC28-210ENST00000558879 DSCR3O14972 297 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 UMODP07911 640 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 TCP1P17987 556 aaKnown RBP16.3■□□□□ 0.2
LRRC28-210ENST00000558879 MCM3P25205 808 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 CCL11P51671 97 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 PGDP52209 483 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 RRADP55042 308 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 THOC5Q13769 683 aaKnown RBP16.3■□□□□ 0.2
LRRC28-210ENST00000558879 SLC9A5Q14940 896 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 ARHGAP19Q14CB8 494 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 NAA25Q14CX7 972 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 TTLL9Q3SXZ7 439 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 MLIPQ5VWP3 458 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 COX15Q7KZN9 410 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 TMEM151BQ8IW70 566 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 TEX19Q8NA77 164 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.3■□□□□ 0.2
LRRC28-210ENST00000558879 FDCSPQ8NFU4 85 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 CD200R1Q8TD46 325 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 CALML6Q8TD86 181 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 MIB2Q96AX9 1013 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 SLC6A20Q9NP91 592 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 FAM114A2Q9NRY5 505 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 CUTCQ9NTM9 273 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 IRAK4Q9NWZ3 460 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 TRMT1Q9NXH9 659 aaKnown RBP16.3■□□□□ 0.2
LRRC28-210ENST00000558879 PCYOX1Q9UHG3 505 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 GPN3Q9UHW5 284 aaPredicted RBP16.3■□□□□ 0.2
LRRC28-210ENST00000558879 PTRH2Q9Y3E5 179 aaKnown RBP16.3■□□□□ 0.2
LRRC28-210ENST00000558879 COMMD10Q9Y6G5 202 aa16.3■□□□□ 0.2
LRRC28-210ENST00000558879 CTAGE9A4FU28 777 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 USP27XA6NNY8 438 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 CATP04040 527 aaKnown RBP16.29■□□□□ 0.2
LRRC28-210ENST00000558879 MPC1LP0DKB6 136 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 ENO3P13929 434 aaPredicted RBP16.29■□□□□ 0.2
LRRC28-210ENST00000558879 OTX2P32243 289 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 CD97P48960 835 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 FOXL2P58012 376 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 YBX1P67809 324 aaKnown RBP16.29■□□□□ 0.2
LRRC28-210ENST00000558879 MPP1Q00013 466 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 CUL1Q13616 776 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 GRM7Q14831 915 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 CRYMQ14894 314 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 PPP1R7Q15435 360 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 FRMPD2BQ6IN97 320 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 TTLL10Q6ZVT0 673 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 KCNMB4Q86W47 210 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 SPNS2Q8IVW8 549 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 PDLIM2Q96JY6 352 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 SMAD5Q99717 465 aaKnown RBP16.29■□□□□ 0.2
LRRC28-210ENST00000558879 SELENOSQ9BQE4 189 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 FAM167BQ9BTA0 163 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 NUDT9Q9BW91 350 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 SLC26A1Q9H2B4 701 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 C20orf96Q9NUD7 363 aaPredicted RBP16.29■□□□□ 0.2
LRRC28-210ENST00000558879 ANKMY1Q9P2S6 941 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 FBXO5Q9UKT4 447 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 DHRS7Q9Y394 339 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 MAD1L1Q9Y6D9 718 aa16.29■□□□□ 0.2
LRRC28-210ENST00000558879 SCN3AQ9NY46 2000 aa16.28■□□□□ 0.2
LRRC28-210ENST00000558879 IGKV1-8A0A0C4DH67 115 aa16.28■□□□□ 0.2
LRRC28-210ENST00000558879 EIF3FO00303 357 aaPredicted RBP16.28■□□□□ 0.2
LRRC28-210ENST00000558879 SRPX2O60687 465 aaPredicted RBP16.28■□□□□ 0.2
LRRC28-210ENST00000558879 SORBS2O94875 1100 aaKnown RBP16.28■□□□□ 0.2
LRRC28-210ENST00000558879 ALBP02768 609 aa16.28■□□□□ 0.2
LRRC28-210ENST00000558879 PGAM1P18669 254 aa16.28■□□□□ 0.2
LRRC28-210ENST00000558879 IVDP26440 423 aa16.28■□□□□ 0.2
LRRC28-210ENST00000558879 CMPK1P30085 196 aa16.28■□□□□ 0.2
LRRC28-210ENST00000558879 PPP1R32Q7Z5V6 425 aa16.28■□□□□ 0.2
LRRC28-210ENST00000558879 LRRC56Q8IYG6 542 aaPredicted RBP16.28■□□□□ 0.2
LRRC28-210ENST00000558879 TTC29Q8NA56 475 aaPredicted RBP16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms