RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 TTI1O43156 1089 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 MATN4O95460 622 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 STATHP02808 62 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 HBQ1P09105 142 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 RAB40ALP0C0E4 278 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 OR1D4P47884 311 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 DCDP81605 110 aaKnown RBP12.01□□□□□ -0.49
SMAD3-208ENST00000558827 ATP1A4Q13733 1029 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 GBX1Q14549 363 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 CRYMQ14894 314 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 NKAIN1Q4KMZ8 207 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 RBM20Q5T481 1227 aaKnown RBP12.01□□□□□ -0.49
SMAD3-208ENST00000558827 FRMPD2BQ6IN97 320 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 PIWIL4Q7Z3Z4 852 aaKnown RBP12.01□□□□□ -0.49
SMAD3-208ENST00000558827 OR4N4Q8N0Y3 316 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 OR2L3Q8NG85 312 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 OR2A1Q8NGT9 310 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 INPP5DQ92835 1189 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 SLC22A18Q96BI1 424 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 ALKBH8Q96BT7 664 aaKnown RBP12.01□□□□□ -0.49
SMAD3-208ENST00000558827 SELENOSQ9BQE4 189 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 SLC6A20Q9NP91 592 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 PPANQ9NQ55 473 aaKnown RBP12.01□□□□□ -0.49
SMAD3-208ENST00000558827 SLC22A11Q9NSA0 550 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 INTS7Q9NVH2 962 aaKnown RBP12.01□□□□□ -0.49
SMAD3-208ENST00000558827 LUZP4Q9P127 313 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 ZC3H7BQ9UGR2 993 aaKnown RBP12.01□□□□□ -0.49
SMAD3-208ENST00000558827 CHMP2BQ9UQN3 213 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 SAR1BQ9Y6B6 198 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 AP1M2Q9Y6Q5 423 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 MAU2Q9Y6X3 613 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 PCSK5Q92824 1860 aa12.01□□□□□ -0.49
SMAD3-208ENST00000558827 CES2O00748 559 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 FFAR3O14843 346 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 GPR42O15529 346 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 ALOX12BO75342 701 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 WISP1O95388 367 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 MED26O95402 600 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 CATP04040 527 aaKnown RBP12□□□□□ -0.49
SMAD3-208ENST00000558827 MSL3P1P0C860 447 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 PGAM1P18669 254 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 IVDP26440 423 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 GABRB3P28472 473 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 RPA3P35244 121 aaPredicted RBP12□□□□□ -0.49
SMAD3-208ENST00000558827 CCNFP41002 786 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 ELK3P41970 407 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 ITGA8P53708 1063 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 MLLT10P55197 1068 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 DR1Q01658 176 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 KCNC4Q03721 635 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 WASHC2DQ5SRD0 308 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 PAPD7Q5XG87 772 aaKnown RBP12□□□□□ -0.49
SMAD3-208ENST00000558827 RHBDD2Q6NTF9 364 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 TLDC1Q6P9B6 456 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 CYHR1Q6ZMK1 362 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 PLD3Q8IV08 490 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 PRSS58Q8IYP2 241 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 RAB42Q8N4Z0 105 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 TEX19Q8NA77 164 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 CD200R1Q8TD46 325 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 ADAMTS17Q8TE56 1095 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 THAP4Q8WY91 577 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 PDLIM2Q96JY6 352 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 KRT12Q99456 494 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 EBNA1BP2Q99848 306 aaKnown RBP12□□□□□ -0.49
SMAD3-208ENST00000558827 AARSD1Q9BTE6 412 aaKnown RBP12□□□□□ -0.49
SMAD3-208ENST00000558827 DPH7Q9BTV6 452 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 SLC25A23Q9BV35 468 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 RAB11FIP5Q9BXF6 653 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 MFRPQ9BY79 579 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 SYNPO2LQ9H987 977 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 TAC3Q9UHF0 121 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 PCYOX1Q9UHG3 505 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 TUBD1Q9UJT1 453 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 VPS9D1Q9Y2B5 631 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 SNX24Q9Y343 169 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 DHRS7Q9Y394 339 aa12□□□□□ -0.49
SMAD3-208ENST00000558827 HEATR5BQ9P2D3 2071 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 RP1L1Q8IWN7 2480 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-208ENST00000558827 PSIP1O75475 530 aaKnown RBP11.99□□□□□ -0.49
SMAD3-208ENST00000558827 KLF7O75840 302 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-208ENST00000558827 ITGAXP20702 1163 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 CMPK1P30085 196 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 FOLR3P41439 243 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 PNLIPRP1P54315 467 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 ADARP55265 1226 aaKnown RBP11.99□□□□□ -0.49
SMAD3-208ENST00000558827 CDKN2DP55273 166 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 TIAL1Q01085 375 aaKnown RBP eCLIP11.99□□□□□ -0.49
SMAD3-208ENST00000558827 CYP2A13Q16696 494 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 TTLL9Q3SXZ7 439 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 ZC3H12BQ5HYM0 836 aaKnown RBP11.99□□□□□ -0.49
SMAD3-208ENST00000558827 FBXO42Q6P3S6 717 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 TRMT10BQ6PF06 316 aaKnown RBP11.99□□□□□ -0.49
SMAD3-208ENST00000558827 MBOAT1Q6ZNC8 495 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 CAPN12Q6ZSI9 719 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 UBE2R2Q712K3 238 aaPredicted RBP11.99□□□□□ -0.49
SMAD3-208ENST00000558827 ADCK2Q7Z695 626 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 CALML6Q8TD86 181 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 MAGEC3Q8TD91 643 aa11.99□□□□□ -0.49
SMAD3-208ENST00000558827 EEF1AKMT1Q8WVE0 214 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms