RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 TSPAN12O95859 305 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 AGTP01019 485 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 HEXBP07686 556 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 COX6A1P12074 109 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 ABOP16442 354 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 NFKB1P19838 968 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 KLK2P20151 261 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 MAGP20916 626 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 ACADLP28330 430 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 DNAJA1P31689 397 aaKnown RBP4.94□□□□□ -1.62
SPG11-208ENST00000558155 CD68P34810 354 aaPredicted RBP4.94□□□□□ -1.62
SPG11-208ENST00000558155 GRIA3P42263 894 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 CHRNA4P43681 627 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 IST1P53990 364 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 TAS2R40P59535 323 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 XIAPP98170 497 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 FOLH1Q04609 750 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 SRSF11Q05519 484 aaKnown RBP4.94□□□□□ -1.62
SPG11-208ENST00000558155 OLIG2Q13516 323 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 PCOLCEQ15113 449 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 SF1Q15637 639 aaKnown RBP4.94□□□□□ -1.62
SPG11-208ENST00000558155 WASHC2DQ5SRD0 308 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 TMEM211Q6ICI0 200 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 HIBCHQ6NVY1 386 aaPredicted RBP4.94□□□□□ -1.62
SPG11-208ENST00000558155 ALKBH5Q6P6C2 394 aaKnown RBP4.94□□□□□ -1.62
SPG11-208ENST00000558155 FIGLAQ6QHK4 219 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 SASS6Q6UVJ0 657 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 NPNTQ6UXI9 565 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 TAS2R42Q7RTR8 314 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 RFX6Q8HWS3 928 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 TMTC1Q8IUR5 882 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 PRSS58Q8IYP2 241 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 TAB3Q8N5C8 712 aaPredicted RBP4.94□□□□□ -1.62
SPG11-208ENST00000558155 METTL27Q8N6F8 245 aaPredicted RBP4.94□□□□□ -1.62
SPG11-208ENST00000558155 FAM98AQ8NCA5 519 aaKnown RBP4.94□□□□□ -1.62
SPG11-208ENST00000558155 OR5AR1Q8NGP9 310 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 OR5K2Q8NHB8 316 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 FLVCR1-AS1Q8TAF5 88 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 ASB5Q8WWX0 329 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 NINJ1Q92982 152 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 C8orf44Q96CB5 159 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 ZNF354BQ96LW1 612 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 OLFM3Q96PB7 478 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 C19orf43Q9BQ61 176 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 VKORC1Q9BQB6 163 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 SELENOSQ9BQE4 189 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 YIPF2Q9BWQ6 316 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 FSD1LQ9BXM9 530 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 FAM96AQ9H5X1 160 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 ENAMQ9NRM1 1142 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 RIC8BQ9NVN3 520 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 CTTNBP2NLQ9P2B4 639 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 KLHL8Q9P2G9 620 aaPredicted RBP4.94□□□□□ -1.62
SPG11-208ENST00000558155 UVRAGQ9P2Y5 699 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 CTSFQ9UBX1 484 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 KCNN3Q9UGI6 736 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 FKBPLQ9UIM3 349 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 TRHDEQ9UKU6 1024 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 NPIPA1Q9UND3 350 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 ARL5AQ9Y689 179 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 MAU2Q9Y6X3 613 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 ABCA4P78363 2273 aa4.94□□□□□ -1.62
SPG11-208ENST00000558155 INTS1Q8N201 2190 aaKnown RBP4.94□□□□□ -1.62
SPG11-208ENST00000558155 SPG11Q96JI7 2443 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 IGLV3-12A0A075B6K2 115 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 IGHV1-45A0A0A0MS14 117 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 A0A1W2PQ72 361 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 TMEM200CA6NKL6 621 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 IDSB3KWA1 339 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 F8W8V4 182 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 RASGRF2O14827 1237 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 PRPF4O43172 522 aaKnown RBP eCLIP4.93□□□□□ -1.62
SPG11-208ENST00000558155 ANXA9O76027 345 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 WISP2O76076 250 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 ZWINTO95229 277 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 FTH1P02794 183 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 RPN2P04844 631 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 SERPING1P05155 500 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 H2AFZP0C0S5 128 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 ITGAMP11215 1152 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 CD9P21926 228 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 FBLP22087 321 aaKnown RBP4.93□□□□□ -1.62
SPG11-208ENST00000558155 MCM3P25205 808 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 EEF1DP29692 281 aaKnown RBP4.93□□□□□ -1.62
SPG11-208ENST00000558155 HCFC1P51610 2035 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 GEMP55040 296 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 VSX2P58304 361 aaPredicted RBP4.93□□□□□ -1.62
SPG11-208ENST00000558155 DYNLT1P63172 113 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 PMP22Q01453 160 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 ZNF33BQ06732 778 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 WASHC5Q12768 1159 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 TFDP2Q14188 446 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 PRPSAP1Q14558 356 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 BRD3Q15059 726 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 MUM1Q2TAK8 710 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 ZNF658BQ4V348 819 aaPredicted RBP4.93□□□□□ -1.62
SPG11-208ENST00000558155 RANBP10Q6VN20 620 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 H2AFVQ71UI9 128 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 TAOK1Q7L7X3 1001 aa4.93□□□□□ -1.62
SPG11-208ENST00000558155 APTXQ7Z2E3 356 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms