RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 PDE7BQ9NP56 450 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 CCDC177Q9NQR7 707 aaPredicted RBP24.62■■□□□ 1.53
SMAD6-202ENST00000557916 FBXO8Q9NRD0 319 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 KLHL20Q9Y2M5 609 aa24.62■■□□□ 1.53
SMAD6-202ENST00000557916 SMIM23A6NLE4 172 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 KLHL2O95198 593 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 ANXA5P08758 320 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 EBLN1P0CF75 366 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 FOLR1P15328 257 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 MAGP20916 626 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 NAE1Q13564 534 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 THEMIS2Q5TEJ8 643 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 KIAA1614Q5VZ46 1190 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 UNQ6494/PRO21346Q6UXR6 183 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 ISCA2Q86U28 154 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 TDRPQ86YL5 185 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 C19orf47Q8N9M1 422 aaKnown RBP24.61■■□□□ 1.53
SMAD6-202ENST00000557916 OR2L3Q8NG85 312 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 OR2W6PQ8NHA6 318 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 STAG3L4Q8TBR4 150 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 MDM1Q8TC05 714 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 EPS8L3Q8TE67 593 aaKnown RBP24.61■■□□□ 1.53
SMAD6-202ENST00000557916 MED8Q96G25 268 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 OR6C1Q96RD1 312 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 ALG9Q9H6U8 611 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 ASCL3Q9NQ33 180 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 INTS7Q9NVH2 962 aaKnown RBP24.61■■□□□ 1.53
SMAD6-202ENST00000557916 TAC3Q9UHF0 121 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 C1QTNF9BB2RNN3 333 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 PRAMEF10O60809 474 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 RFPL1O75677 317 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 C1QTNF9P0C862 333 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 CMPK1P30085 196 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 RAB15P59190 212 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 TBPL1P62380 186 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 ACY1Q03154 408 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 TGFBIQ15582 683 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 ZIC1Q15915 447 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 TMEM164Q5U3C3 297 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 ALKBH8Q96BT7 664 aaKnown RBP24.61■■□□□ 1.53
SMAD6-202ENST00000557916 TCTN2Q96GX1 697 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 CTRCQ99895 268 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 CCDC86Q9H6F5 360 aaKnown RBP24.61■■□□□ 1.53
SMAD6-202ENST00000557916 APMAPQ9HDC9 416 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 RNF112Q9ULX5 631 aa24.61■■□□□ 1.53
SMAD6-202ENST00000557916 POLR1CO15160 346 aaPredicted RBP24.6■■□□□ 1.53
SMAD6-202ENST00000557916 KCNC1P48547 511 aa24.6■■□□□ 1.53
SMAD6-202ENST00000557916 IFFO1Q0D2I5 559 aa24.6■■□□□ 1.53
SMAD6-202ENST00000557916 ZXDCQ2QGD7 858 aaPredicted RBP24.6■■□□□ 1.53
SMAD6-202ENST00000557916 DCAF12Q5T6F0 453 aa24.6■■□□□ 1.53
SMAD6-202ENST00000557916 KLC3Q6P597 504 aa24.6■■□□□ 1.53
SMAD6-202ENST00000557916 PMEPA1Q969W9 287 aa24.6■■□□□ 1.53
SMAD6-202ENST00000557916 CABS1Q96KC9 395 aa24.6■■□□□ 1.53
SMAD6-202ENST00000557916 THSD1Q9NS62 852 aa24.6■■□□□ 1.53
SMAD6-202ENST00000557916 NCF1BA6NI72 391 aaPredicted RBP24.59■■□□□ 1.53
SMAD6-202ENST00000557916 NCF1CA8MVU1 366 aaPredicted RBP24.59■■□□□ 1.53
SMAD6-202ENST00000557916 CDRT15L2A8MXV6 281 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 NCF1P14598 390 aaPredicted RBP24.59■■□□□ 1.53
SMAD6-202ENST00000557916 CCND1P24385 295 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 GRIA3P42263 894 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 GLRBP48167 497 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 ERVPABLB-1P60509 514 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 YBX1P67809 324 aaKnown RBP24.59■■□□□ 1.53
SMAD6-202ENST00000557916 PRDX1Q06830 199 aaKnown RBP24.59■■□□□ 1.53
SMAD6-202ENST00000557916 TUBB3Q13509 450 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 ACAP2Q15057 778 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 RASA2Q15283 850 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 ICE2Q659A1 982 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 CAPN13Q6MZZ7 669 aaPredicted RBP24.59■■□□□ 1.53
SMAD6-202ENST00000557916 CYB5D1Q6P9G0 228 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 FIGLAQ6QHK4 219 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 CEACAM20Q6UY09 585 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 CDHR3Q6ZTQ4 885 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 PLD6Q8N2A8 252 aaKnown RBP24.59■■□□□ 1.53
SMAD6-202ENST00000557916 PYCR2Q96C36 320 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 ZNF578Q96N58 590 aaPredicted RBP24.59■■□□□ 1.53
SMAD6-202ENST00000557916 GPR78Q96P69 363 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 DDA1Q9BW61 102 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 SGPP1Q9BX95 441 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 ASPSCR1Q9BZE9 553 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 CHRNA10Q9GZZ6 450 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 PCBD2Q9H0N5 130 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 FAM60AQ9NP50 221 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 MRPS30Q9NP92 439 aaKnown RBP24.59■■□□□ 1.53
SMAD6-202ENST00000557916 FGF21Q9NSA1 209 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 DKK4Q9UBT3 224 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 PCDHGA7Q9Y5G6 932 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 PCDHGA3Q9Y5H0 932 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 ANKRD12Q6UB98 2062 aa24.59■■□□□ 1.53
SMAD6-202ENST00000557916 C9orf172C9J069 976 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 NVLO15381 856 aaKnown RBP24.58■■□□□ 1.53
SMAD6-202ENST00000557916 KERAO60938 352 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 CDH16O75309 829 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 ERLIN1O75477 346 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 CCNDBP1O95273 360 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 COL6A2P12110 1019 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 SLC5A2P31639 672 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 HNMTP50135 292 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 IL11RAQ14626 422 aa24.58■■□□□ 1.53
SMAD6-202ENST00000557916 GPR19Q15760 415 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms