RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 B3GALT1Q9Y5Z6 326 aa13.82□□□□□ -0.2
USP3-205ENST00000557884 A0A096LPK6 155 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 NCF1BA6NI72 391 aaPredicted RBP13.81□□□□□ -0.2
USP3-205ENST00000557884 SMIM23A6NLE4 172 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 NCF1CA8MVU1 366 aaPredicted RBP13.81□□□□□ -0.2
USP3-205ENST00000557884 MAP3K7O43318 606 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 ENO2P09104 434 aaPredicted RBP13.81□□□□□ -0.2
USP3-205ENST00000557884 NCF1P14598 390 aaPredicted RBP13.81□□□□□ -0.2
USP3-205ENST00000557884 AP1S2P56377 157 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 RAB15P59190 212 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 ATP6V0D1P61421 351 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 TBPL1P62380 186 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 DCAF12Q5T6F0 453 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 TMEM164Q5U3C3 297 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 FIGLAQ6QHK4 219 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 CEACAM20Q6UY09 585 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 CDHR3Q6ZTQ4 885 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 LRRC56Q8IYG6 542 aaPredicted RBP13.81□□□□□ -0.2
USP3-205ENST00000557884 OR2L3Q8NG85 312 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 OR2A1Q8NGT9 310 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 ANKRD7Q92527 254 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 EXT2Q93063 718 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 NXNL1Q96CM4 212 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 NAF1Q96HR8 494 aaKnown RBP13.81□□□□□ -0.2
USP3-205ENST00000557884 UBXN10Q96LJ8 280 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 ZNF578Q96N58 590 aaPredicted RBP13.81□□□□□ -0.2
USP3-205ENST00000557884 EGFL8Q99944 293 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 CCDC77Q9BR77 488 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 ALG9Q9H6U8 611 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 FAM60AQ9NP50 221 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 CCDC177Q9NQR7 707 aaPredicted RBP13.81□□□□□ -0.2
USP3-205ENST00000557884 FBXO8Q9NRD0 319 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 FGF21Q9NSA1 209 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 WDR70Q9NW82 654 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 PSMC3IPQ9P2W1 217 aaPredicted RBP13.81□□□□□ -0.2
USP3-205ENST00000557884 NOVA2Q9UNW9 492 aaKnown RBP13.81□□□□□ -0.2
USP3-205ENST00000557884 RAXQ9Y2V3 346 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 ACOT9Q9Y305 439 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 OARD1Q9Y530 152 aa13.81□□□□□ -0.2
USP3-205ENST00000557884 ZZEF1O43149 2961 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 TPRP12270 2363 aaKnown RBP13.8□□□□□ -0.2
USP3-205ENST00000557884 ZFHX4Q86UP3 3567 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 A0A087X1B8 175 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 NVLO15381 856 aaKnown RBP13.8□□□□□ -0.2
USP3-205ENST00000557884 NRP2O60462 931 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 KRT37O76014 449 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 SNRPAP09012 282 aaKnown RBP13.8□□□□□ -0.2
USP3-205ENST00000557884 LTA4HP09960 611 aaKnown RBP13.8□□□□□ -0.2
USP3-205ENST00000557884 TFEBP19484 476 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 CNTFP26441 200 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 CMPK1P30085 196 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 GRIA3P42263 894 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 SLCO1A2P46721 670 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 GLRBP48167 497 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 CSRP3P50461 194 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 ERVPABLB-1P60509 514 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 ACY1Q03154 408 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 COL9A2Q14055 689 aaPredicted RBP13.8□□□□□ -0.2
USP3-205ENST00000557884 KIF26BQ2KJY2 2108 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 FCRL6Q6DN72 434 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 EMBQ6PCB8 327 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 ADGRD1Q6QNK2 874 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 CLEC14AQ86T13 490 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 ZFAND4Q86XD8 727 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 GPSM1Q86YR5 675 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 CENPLQ8N0S6 344 aaPredicted RBP13.8□□□□□ -0.2
USP3-205ENST00000557884 FGF11Q92914 225 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 PYCR2Q96C36 320 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 FBXL8Q96CD0 374 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 TCTN2Q96GX1 697 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 DDA1Q9BW61 102 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 ASPSCR1Q9BZE9 553 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 NMRAL1Q9HBL8 299 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 SLC6A20Q9NP91 592 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 INTS7Q9NVH2 962 aaKnown RBP13.8□□□□□ -0.2
USP3-205ENST00000557884 DKK4Q9UBT3 224 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 TBK1Q9UHD2 729 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 RARRES3Q9UL19 164 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 PCDHGA7Q9Y5G6 932 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 PCDHGA3Q9Y5H0 932 aa13.8□□□□□ -0.2
USP3-205ENST00000557884 TMEM8BA6NDV4 472 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 TMEM150CB9EJG8 249 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 TAF4O00268 1085 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 HCRTR1O43613 425 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 ZNF28P17035 718 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 MAGEA12P43365 314 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 PCBP4P57723 403 aaKnown RBP13.79□□□□□ -0.2
USP3-205ENST00000557884 FAM83EQ2M2I3 478 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 ZXDCQ2QGD7 858 aaPredicted RBP13.79□□□□□ -0.2
USP3-205ENST00000557884 C18orf21Q32NC0 220 aaPredicted RBP13.79□□□□□ -0.2
USP3-205ENST00000557884 LGSNQ5TDP6 509 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 PRAMEF13Q5VWM6 474 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 ICE2Q659A1 982 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 KDF1Q8NAX2 398 aaPredicted RBP13.79□□□□□ -0.2
USP3-205ENST00000557884 OR1L3Q8NH93 324 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 OR2W6PQ8NHA6 318 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 ATL1Q8WXF7 558 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 N4BP2L2Q92802 583 aaPredicted RBP13.79□□□□□ -0.2
USP3-205ENST00000557884 CAVIN3Q969G5 261 aa13.79□□□□□ -0.2
USP3-205ENST00000557884 ISL2Q96A47 359 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms