RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 RASSF9O75901 435 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 C9P02748 559 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 PVRP15151 417 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 RPA3P35244 121 aaPredicted RBP14.75□□□□□ -0.05
NEDD1-213ENST00000557644 HNMTP50135 292 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 SF1Q15637 639 aaKnown RBP14.75□□□□□ -0.05
NEDD1-213ENST00000557644 TTMPQ5BVD1 217 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 THEMIS2Q5TEJ8 643 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 CDCP2Q5VXM1 449 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 SULT1C3Q6IMI6 304 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 MARCH9Q86YJ5 346 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 SLITRK4Q8IW52 837 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 OR4D9Q8NGE8 314 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 ZDHHC12Q96GR4 267 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 OR4K3Q96R72 315 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 RAB33BQ9H082 229 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 CCDC177Q9NQR7 707 aaPredicted RBP14.75□□□□□ -0.05
NEDD1-213ENST00000557644 SH2B3Q9UQQ2 575 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 SLC22A14Q9Y267 594 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 ENTPD2Q9Y5L3 495 aa14.75□□□□□ -0.05
NEDD1-213ENST00000557644 CCDC189A1A4V9 331 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 ZNF839A8K0R7 811 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 PRAMEF10O60809 474 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 SIX3O95343 332 aaPredicted RBP14.74□□□□□ -0.05
NEDD1-213ENST00000557644 S100BP04271 92 aaPredicted RBP14.74□□□□□ -0.05
NEDD1-213ENST00000557644 OAS2P29728 719 aaKnown RBP14.74□□□□□ -0.05
NEDD1-213ENST00000557644 PUM1Q14671 1186 aaKnown RBP eCLIP14.74□□□□□ -0.05
NEDD1-213ENST00000557644 RBM44Q6ZP01 1051 aaKnown RBP14.74□□□□□ -0.05
NEDD1-213ENST00000557644 FBXO39Q8N4B4 442 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 PTGR2Q8N8N7 351 aaPredicted RBP14.74□□□□□ -0.05
NEDD1-213ENST00000557644 CCDC74BQ96LY2 380 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 FAM111AQ96PZ2 611 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 SGPP1Q9BX95 441 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 IQCGQ9H095 443 aaKnown RBP14.74□□□□□ -0.05
NEDD1-213ENST00000557644 ASPMQ8IZT6 3477 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 COL27A1Q8IZC6 1860 aaPredicted RBP14.74□□□□□ -0.05
NEDD1-213ENST00000557644 IGHV5-51A0A0C4DH38 117 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 KLK8O60259 260 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 MT-CO3P00414 261 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 SLC6A12P48065 614 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 MPP2Q14168 576 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 CDKL4Q5MAI5 379 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 PHF19Q5T6S3 580 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 KIAA1614Q5VZ46 1190 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 ARMC2Q8NEN0 867 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 WDR48Q8TAF3 677 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 STMN4Q9H169 189 aaPredicted RBP14.74□□□□□ -0.05
NEDD1-213ENST00000557644 ACSS2Q9NR19 701 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 PCDHB11Q9Y5F2 797 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 ACTL7BQ9Y614 415 aa14.74□□□□□ -0.05
NEDD1-213ENST00000557644 FAM149AA5PLN7 773 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 A8MT66 165 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 G3V2L1 256 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 MATN2O00339 956 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 NRP2O60462 931 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 DLX3O60479 287 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 THRAP10827 490 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 ST6GAL1P15907 406 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 NPPBP16860 134 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 GGT5P36269 586 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 SEPHS1P49903 392 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 ZFP36L1Q07352 338 aaKnown RBP14.73□□□□□ -0.05
NEDD1-213ENST00000557644 SETDB1Q15047 1291 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 CACHD1Q5VU97 1274 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 PRAMEF13Q5VWM6 474 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 CAPN13Q6MZZ7 669 aaPredicted RBP14.73□□□□□ -0.05
NEDD1-213ENST00000557644 CCDC63Q8NA47 563 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 OR2L3Q8NG85 312 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 SLC22A18Q96BI1 424 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 MOCOSQ96EN8 888 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 PDP2Q9P2J9 529 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 KNTC1P50748 2209 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 SNRNP200O75643 2136 aaKnown RBP14.73□□□□□ -0.05
NEDD1-213ENST00000557644 DYNC1I1O14576 645 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 SMIM24O75264 130 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 WDR47O94967 919 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 CDK4P11802 303 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 CDH3P22223 829 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 ALDH18A1P54886 795 aaKnown RBP14.73□□□□□ -0.05
NEDD1-213ENST00000557644 CCDC153Q494R4 210 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 AGBL2Q5U5Z8 902 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 THOC6Q86W42 341 aaKnown RBP14.73□□□□□ -0.05
NEDD1-213ENST00000557644 TCAIMQ8N3R3 496 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 CHCHD4Q8N4Q1 142 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 ADAMTS14Q8WXS8 1223 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 ATP6V1G3Q96LB4 118 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 PITPNM3Q9BZ71 974 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 CD244Q9BZW8 370 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 KCNK9Q9NPC2 374 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 CLCA2Q9UQC9 943 aa14.73□□□□□ -0.05
NEDD1-213ENST00000557644 IGKV1-8A0A0C4DH67 115 aa14.72□□□□□ -0.05
NEDD1-213ENST00000557644 TLCD2A6NGC4 264 aa14.72□□□□□ -0.05
NEDD1-213ENST00000557644 SLC9B1P1A6NJY1 282 aa14.72□□□□□ -0.05
NEDD1-213ENST00000557644 CCNT2O60583 730 aaKnown RBP14.72□□□□□ -0.05
NEDD1-213ENST00000557644 STK16O75716 305 aa14.72□□□□□ -0.05
NEDD1-213ENST00000557644 MAGP20916 626 aa14.72□□□□□ -0.05
NEDD1-213ENST00000557644 ID4P47928 161 aa14.72□□□□□ -0.05
NEDD1-213ENST00000557644 ZIC1Q15915 447 aa14.72□□□□□ -0.05
NEDD1-213ENST00000557644 CLPPQ16740 277 aaPredicted RBP14.72□□□□□ -0.05
NEDD1-213ENST00000557644 ISXQ2M1V0 245 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms