RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 SIM2Q14190 667 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-232ENST00000557487 MRPL58Q14197 206 aaKnown RBP15.87■□□□□ 0.13
SHMT2-232ENST00000557487 GBX1Q14549 363 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 PHKG1Q16816 387 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 ZNF404Q494X3 552 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 GTDC1Q4AE62 458 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 CARD16Q5EG05 197 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 MLIPQ5VWP3 458 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 CCDC81Q6ZN84 652 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 PAGE2Q7Z2X7 111 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 HORMAD1Q86X24 394 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 BEND7Q8N7W2 519 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-232ENST00000557487 CHAC2Q8WUX2 184 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 NUDT8Q8WV74 236 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 MAGEB10Q96LZ2 347 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-232ENST00000557487 CTRCQ99895 268 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 SPATA9Q9BWV2 254 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 CWH43Q9H720 699 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 BPIFA1Q9NP55 256 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 EXD2Q9NVH0 621 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 VNN3Q9NY84 501 aa15.87■□□□□ 0.13
SHMT2-232ENST00000557487 EVLQ9UI08 416 aaPredicted RBP15.87■□□□□ 0.13
SHMT2-232ENST00000557487 SERTM1A2A2V5 107 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 IQCF5A8MTL0 148 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 MYO1DO94832 1006 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 FADS2O95864 444 aaKnown RBP15.86■□□□□ 0.13
SHMT2-232ENST00000557487 CBSLP0DN79 551 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 CD36P16671 472 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 PTPN6P29350 595 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 CBSP35520 551 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 TGFBR2P37173 567 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 GJA8P48165 433 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 PCYT1AP49585 367 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 NCS1P62166 190 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 ZNF45Q02386 682 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 TEKQ02763 1124 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 FAM26DQ5JW98 314 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 FAHD1Q6P587 224 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 GALNT5Q7Z7M9 940 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 CPA6Q8N4T0 437 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 ATAD1Q8NBU5 361 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 C2orf15Q8WU43 125 aaKnown RBP15.86■□□□□ 0.13
SHMT2-232ENST00000557487 EXOC2Q96KP1 924 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 HHIPQ96QV1 700 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 GPR63Q9BZJ6 419 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 KRT84Q9NSB2 600 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 PLCXD1Q9NUJ7 323 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 KIF17Q9P2E2 1029 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 ZNF229Q9UJW7 825 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 ATP11BQ9Y2G3 1177 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 ACTL7AQ9Y615 435 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 BPTFQ12830 3046 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 A0A1B0GVM2 712 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 MYADML2A6NDP7 307 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 LOC730098B7Z3J9 87 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 FZD6O60353 706 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 PRMT3O60678 531 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 STK16O75716 305 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 GUCA1CO95843 209 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 PTTG1O95997 202 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 GSTT2P0CG29 244 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 GSTT2BP0CG30 244 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 CYBAP13498 195 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 ITGALP20701 1170 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 FUT4P22083 530 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 ATP5C1P36542 298 aaKnown RBP15.86■□□□□ 0.13
SHMT2-232ENST00000557487 GSSP48637 474 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 KCNQ1P51787 676 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 ELP6Q0PNE2 266 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 PPP1R8Q12972 351 aaKnown RBP15.86■□□□□ 0.13
SHMT2-232ENST00000557487 DNASE1L3Q13609 305 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 GTF2H3Q13889 308 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 TBCEQ15813 527 aaPredicted RBP15.86■□□□□ 0.13
SHMT2-232ENST00000557487 TMEM236Q5W0B7 351 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 CXCL17Q6UXB2 119 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 MACC1Q6ZN28 852 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 USP43Q70EL4 1123 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 TCAIMQ8N3R3 496 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 ZBTB2Q8N680 514 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 AMER2Q8N7J2 671 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 NELL1Q92832 810 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 PLD4Q96BZ4 506 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 CMTM7Q96FZ5 175 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 HERC2P3Q9BVR0 1158 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 DCSTAMPQ9H295 470 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 LATS2Q9NRM7 1088 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 AASDHPPTQ9NRN7 309 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 FBXO10Q9UK96 956 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 SNX6Q9UNH7 406 aa15.86■□□□□ 0.13
SHMT2-232ENST00000557487 ARVCFO00192 962 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 EIF3FO00303 357 aaPredicted RBP15.85■□□□□ 0.13
SHMT2-232ENST00000557487 RFXANKO14593 260 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 AXIN1O15169 862 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 ZNF682O95780 498 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 PTPN2P17706 415 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 CLK1P49759 484 aaKnown RBP15.85■□□□□ 0.13
SHMT2-232ENST00000557487 ITGA1P56199 1179 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 LSM3P62310 102 aaKnown RBP15.85■□□□□ 0.13
SHMT2-232ENST00000557487 NKX3-2P78367 333 aa15.85■□□□□ 0.13
SHMT2-232ENST00000557487 CD300CQ08708 224 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms