RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 NPHP4O75161 1426 aaPredicted RBP3.5□□□□□ -1.85
VRK1-207ENST00000557352 DCCP43146 1447 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 CPSF1Q10570 1443 aaKnown RBP3.5□□□□□ -1.85
VRK1-207ENST00000557352 PTPRUQ92729 1446 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 LTN1O94822 1766 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 TRPM3Q9HCF6 1732 aaPredicted RBP3.5□□□□□ -1.85
VRK1-207ENST00000557352 CRYBG1Q9Y4K1 1723 aa3.5□□□□□ -1.85
VRK1-207ENST00000557352 CCDC189A1A4V9 331 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 EPM2AB3EWF7 344 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 B4E171 279 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 SOCS3O14543 225 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 RB1P06400 928 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 ARL3P36405 182 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 MMP12P39900 470 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 OPRL1P41146 370 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 TSPAN7P41732 249 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 SUOXP51687 545 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 GSCP56915 257 aaPredicted RBP3.49□□□□□ -1.85
VRK1-207ENST00000557352 HUNKP57058 714 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 KRTAP12-2P59991 146 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 HERV-K104P61576 105 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 MS4A2Q01362 244 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 NFATC2Q13469 925 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 MMS22LQ6ZRQ5 1243 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 KIRREL3Q8IZU9 778 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 LINC00612Q8N6U2 182 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 NIPA2Q8N8Q9 360 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 ARHGAP45Q92619 1136 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 USP6NLQ92738 828 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 SLCO2A1Q92959 643 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 S1PR5Q9H228 398 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 OSER1Q9NX31 292 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 NUDT4Q9NZJ9 180 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 PPP1R3CQ9UQK1 317 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 RGPD1P0DJD0 1748 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 PIK3C2AO00443 1686 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 ALS2Q96Q42 1657 aa3.49□□□□□ -1.85
VRK1-207ENST00000557352 FAM208AQ9UK61 1670 aaKnown RBP3.49□□□□□ -1.85
VRK1-207ENST00000557352 EDC4Q6P2E9 1401 aaKnown RBP3.48□□□□□ -1.85
VRK1-207ENST00000557352 SMG6Q86US8 1419 aaKnown RBP3.48□□□□□ -1.85
VRK1-207ENST00000557352 ADGRL3Q9HAR2 1447 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 HYKKA2RU49 373 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 HEPACAM2A8MVW5 462 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 CDRT15L2A8MXV6 281 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 CLTBP09497 229 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 MMP9P14780 707 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 CAPN2P17655 700 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 SLC6A6P31641 620 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 LEPRP48357 1165 aaKnown RBP3.48□□□□□ -1.85
VRK1-207ENST00000557352 PDX1P52945 283 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 PAX9P55771 341 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 COX10Q12887 443 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 KRT33BQ14525 404 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 ALFQ53S48 1182 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 FBXL16Q8N461 479 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 SCFD2Q8WU76 684 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 UCMAQ8WVF2 138 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 IRGQQ8WZA9 623 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 CENPTQ96BT3 561 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 CEP295NLQ96MC4 621 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 BTBD10Q9BSF8 475 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 PANK4Q9NVE7 773 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 THEGQ9P2T0 379 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 AASSQ9UDR5 926 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 GRID1Q9ULK0 1009 aa3.48□□□□□ -1.85
VRK1-207ENST00000557352 POLR3AO14802 1390 aaPredicted RBP3.48□□□□□ -1.85
VRK1-207ENST00000557352 NOTCH2Q04721 2471 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 BLMP54132 1417 aaPredicted RBP3.47□□□□□ -1.85
VRK1-207ENST00000557352 NSD3Q9BZ95 1437 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 IGHV3OR16-10A0A075B7F0 116 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 A0A1W2PNU3 283 aaPredicted RBP3.47□□□□□ -1.85
VRK1-207ENST00000557352 RNASEH1O60930 286 aaKnown RBP3.47□□□□□ -1.85
VRK1-207ENST00000557352 MITFO75030 526 aaPredicted RBP3.47□□□□□ -1.85
VRK1-207ENST00000557352 CREG1O75629 220 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 IGHV4-31P0DP07 118 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 CYP2A7P20853 494 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 PTGER3P43115 390 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 MPP1Q00013 466 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 MAMLD1Q13495 774 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 HAUS3Q68CZ6 603 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 COMMD2Q86X83 199 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 TMEM139Q8IV31 216 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 OR10G8Q8NGN5 311 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 OR5M8Q8NGP6 311 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 OR2AJ1Q8NGZ0 328 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 OR2L2Q8NH16 312 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 MOSPD2Q8NHP6 518 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 ZNF519Q8TB69 540 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 PHLDA1Q8WV24 401 aaPredicted RBP3.47□□□□□ -1.85
VRK1-207ENST00000557352 LRRC59Q96AG4 307 aaKnown RBP3.47□□□□□ -1.85
VRK1-207ENST00000557352 PRAM1Q96QH2 718 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 NAP1L4Q99733 375 aaKnown RBP3.47□□□□□ -1.85
VRK1-207ENST00000557352 SOSTQ9BQB4 213 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 NUP85Q9BW27 656 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 CHMP4AQ9BY43 222 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 RTN4RQ9BZR6 473 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 DPAGT1Q9H3H5 408 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 UNC45AQ9H3U1 944 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 PANK3Q9H999 370 aa3.47□□□□□ -1.85
VRK1-207ENST00000557352 FGF21Q9NSA1 209 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms