RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 SYT3Q9BQG1 590 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 SAMD10Q9BYL1 202 aa8.66□□□□□ -1.02
SYNE3-205ENST00000557275 PIM1P11309 404 aaPredicted RBP8.65□□□□□ -1.02
SYNE3-205ENST00000557275 DNAJB1P25685 340 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 PRKCIP41743 596 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 BNIP1Q12981 228 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 TMEM203Q969S6 136 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 PPA2Q9H2U2 334 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 ACSL5Q9ULC5 683 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 ERBB3P21860 1342 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 CAPSQ13938 189 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 DOK6Q6PKX4 331 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 PLEKHG7Q6ZR37 379 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 C19orf35Q6ZS72 473 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 PXKQ7Z7A4 578 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 SVBPQ8N300 66 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 ASPNQ9BXN1 380 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 STARD7Q9NQZ5 370 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 ELOA3DA6NLF2 546 aaPredicted RBP8.65□□□□□ -1.02
SYNE3-205ENST00000557275 CHRNB2P17787 502 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 KLRC2P26717 231 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 RIDAP52758 137 aaKnown RBP8.65□□□□□ -1.02
SYNE3-205ENST00000557275 ELOA3BQ3SY89 546 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 JAGN1Q8N5M9 183 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 ELOA3Q8NG57 546 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 TM9SF4Q92544 642 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 OSGEPQ9NPF4 335 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 P2RX2Q9UBL9 471 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 CACNG1Q06432 222 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 PIGGQ5H8A4 983 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 NCCRP1Q6ZVX7 275 aaPredicted RBP8.65□□□□□ -1.02
SYNE3-205ENST00000557275 GSTCDQ8NEC7 633 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 OR5T2Q8NGG2 359 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 ZNRF3Q9ULT6 936 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 ERVK-11Q9UQG0 969 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 TCRBV9S1A1TA0A576 114 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 BPGMP07738 259 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 DRD4P21917 467 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 HERVK_113P62684 666 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 LAMTOR4Q0VGL1 99 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 TMED4Q7Z7H5 227 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 ACSF2Q96CM8 615 aaPredicted RBP8.65□□□□□ -1.02
SYNE3-205ENST00000557275 MAELQ96JY0 434 aaKnown RBP8.65□□□□□ -1.02
SYNE3-205ENST00000557275 ISM1B1AKI9 464 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 B3GALT2O43825 422 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 TAS2R20P59543 309 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 PSPHP78330 225 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 OR52B2Q96RD2 323 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 PHOX2BQ99453 314 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 FN3KQ9H479 309 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 TDRD3Q9H7E2 651 aaKnown RBP8.65□□□□□ -1.02
SYNE3-205ENST00000557275 FLRT1Q9NZU1 646 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 MFSD11O43934 449 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 CDH1P12830 882 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 GNB3P16520 340 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 RAB4BP61018 213 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 ZNF616Q08AN1 781 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 RLIMQ9NVW2 624 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 GSKIPQ9P0R6 139 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 CDC7O00311 574 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 ENPP2Q13822 863 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 DNAJC18Q9H819 358 aa8.65□□□□□ -1.02
SYNE3-205ENST00000557275 KIF13AQ9H1H9 1805 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 S1PR1P21453 382 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 KLK7P49862 253 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 SF1Q15637 639 aaKnown RBP8.65□□□□□ -1.03
SYNE3-205ENST00000557275 CREG2Q8IUH2 290 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 GLTPQ9NZD2 209 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 ZNF225Q9UK10 706 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 C2orf78A6NCI8 922 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 LIASO43766 372 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 NDUFS1P28331 727 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 FGL2Q14314 439 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 C16orf46Q6P387 395 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 COL20A1Q9P218 1284 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 KCNS2Q9ULS6 477 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 SCDO00767 359 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 LRATO95237 230 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 EXOC3L2Q2M3D2 409 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 SV2AQ7L0J3 742 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 TMPRSS11BQ86T26 416 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 RBM12BQ8IXT5 1001 aaKnown RBP8.65□□□□□ -1.03
SYNE3-205ENST00000557275 RGL4Q8IZJ4 473 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 DPF2Q92785 391 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 TAAR8Q969N4 342 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 SLA2Q9H6Q3 261 aa8.65□□□□□ -1.03
SYNE3-205ENST00000557275 A0A1W2PQ45 241 aaPredicted RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 A0A1W2PQY0 241 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CPSF4LA6NMK7 179 aaKnown RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 BHLHE40O14503 412 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 RNASE12Q5GAN4 147 aaKnown RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 RTL6Q6ICC9 239 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 METTL7BQ6UX53 244 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 SPOCK2Q92563 424 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 COL21A1Q96P44 957 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CD180Q99467 661 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 CDC6Q99741 560 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 URM1Q9BTM9 101 aaKnown RBP8.64□□□□□ -1.03
SYNE3-205ENST00000557275 BLOC1S4Q9NUP1 217 aa8.64□□□□□ -1.03
SYNE3-205ENST00000557275 NPHS1O60500 1241 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms