RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 COLEC12Q5KU26 742 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 HORMAD1Q86X24 394 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 MINDY2Q8NBR6 621 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 SELENOMQ8WWX9 145 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 BHMTQ93088 406 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 DPH2Q9BQC3 489 aaPredicted RBP11.09□□□□□ -0.63
SRP54-213ENST00000556994 SIAEQ9HAT2 523 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 IL1RAPQ9NPH3 570 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 AASDHPPTQ9NRN7 309 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 KIF17Q9P2E2 1029 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 HCSTQ9UBK5 93 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 SAMHD1Q9Y3Z3 626 aaKnown RBP11.09□□□□□ -0.63
SRP54-213ENST00000556994 VWA8A3KMH1 1905 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 TTC36A6NLP5 189 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 PCDHGA12O60330 932 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 VIPP01282 170 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 C21orf33P30042 268 aaPredicted RBP11.09□□□□□ -0.63
SRP54-213ENST00000556994 ATP5C1P36542 298 aaKnown RBP11.09□□□□□ -0.63
SRP54-213ENST00000556994 CLK1P49759 484 aaKnown RBP11.09□□□□□ -0.63
SRP54-213ENST00000556994 PPP5CP53041 499 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 DSC1Q08554 894 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 LRIF1Q5T3J3 769 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 NCEH1Q6PIU2 408 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 ARMC8Q8IUR7 673 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 ADGRG2Q8IZP9 1017 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 PAF1Q8N7H5 531 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 SCAIQ8N9R8 606 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 FAM83FQ8NEG4 500 aaPredicted RBP11.09□□□□□ -0.63
SRP54-213ENST00000556994 WBP2Q969T9 261 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 APOL4Q9BPW4 351 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 TM6SF2Q9BZW4 377 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 C6orf62Q9GZU0 229 aaPredicted RBP11.09□□□□□ -0.63
SRP54-213ENST00000556994 DCSTAMPQ9H295 470 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 RNF167Q9H6Y7 350 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 ITM2CQ9NQX7 267 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 KRT84Q9NSB2 600 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 OSGIN1Q9UJX0 560 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 NDRG4Q9ULP0 352 aaKnown RBP11.09□□□□□ -0.63
SRP54-213ENST00000556994 PCDHB1Q9Y5F3 818 aa11.09□□□□□ -0.63
SRP54-213ENST00000556994 OR2A25A4D2G3 310 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 NT5C1B-RDH14C9J2C7 533 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 GAPDHSO14556 408 aaPredicted RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 WBP4O75554 376 aaKnown RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 STK16O75716 305 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 CCNDBP1O95273 360 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 FABP3P05413 133 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 EBLN1P0CF75 366 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 DBTP11182 482 aaKnown RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 EPORP19235 508 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 DGKAP23743 735 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 PAX3P23760 479 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 MZF1P28698 734 aaPredicted RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 GTF2E2P29084 291 aaKnown RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 SERPINB1P30740 379 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 GKP32189 559 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 HMGCLP35914 325 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 EIF2DP41214 584 aaKnown RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 SLC11A2P49281 568 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 CLDN8P56748 225 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 RPP38P78345 283 aaKnown RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 ABHD18Q0P651 414 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 SOWAHCQ53LP3 525 aaPredicted RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 LYSMD2Q8IV50 215 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 ZBTB2Q8N680 514 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 ZNF513Q8N8E2 541 aaPredicted RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 Q8N9G6 341 aaPredicted RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 STARD8Q92502 1023 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 PROX1Q92786 737 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 DNASE1L2Q92874 299 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 USP7Q93009 1102 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 APIPQ96GX9 242 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 FAM193BQ96PV7 902 aaPredicted RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 BCL7BQ9BQE9 202 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 NTMT1Q9BV86 223 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 THG1LQ9NWX6 298 aaKnown RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 DNMT3LQ9UJW3 386 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 SAMD4AQ9UPU9 718 aaKnown RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 ZNF451Q9Y4E5 1061 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 ILVBLA1L0T0 632 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 K7ERQ8 282 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 WNT9AO14904 365 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 CLDN11O75508 207 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 CLDN9O95484 217 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 ASGR1P07306 291 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 SPNP16150 400 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 HOXB9P17482 250 aaPredicted RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 ENGP17813 658 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 CORO1AP31146 461 aaKnown RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 DNAJA1P31689 397 aaKnown RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 GRK3P35626 688 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 ZXDBP98169 803 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 IRF5Q13568 498 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 SF3B4Q15427 424 aaKnown RBP eCLIP11.08□□□□□ -0.642e-8■■□□□ 14.5
SRP54-213ENST00000556994 C5orf22Q49AR2 442 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 PDE12Q6L8Q7 609 aaKnown RBP11.08□□□□□ -0.64
SRP54-213ENST00000556994 GPR153Q6NV75 609 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 ZNF621Q6ZSS3 439 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 CARNMT1Q8N4J0 409 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 SVOPQ8N4V2 548 aa11.08□□□□□ -0.64
SRP54-213ENST00000556994 POC5Q8NA72 575 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms