RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 PSMA3P25788 255 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 CNTFP26441 200 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 CA5AP35218 305 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 ARCN1P48444 511 aaKnown RBP12.3□□□□□ -0.44
PSEN1-219ENST00000556951 PDE1BQ01064 536 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 THOC5Q13769 683 aaKnown RBP12.3□□□□□ -0.44
PSEN1-219ENST00000556951 KHDC1Q4VXA5 237 aaKnown RBP12.3□□□□□ -0.44
PSEN1-219ENST00000556951 TEDDM1Q5T9Z0 273 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 GRTP1Q5TC63 336 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 PRAMEF17Q5VTA0 474 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 AGAP9Q5VTM2 703 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 CXXC5Q7LFL8 322 aaKnown RBP12.3□□□□□ -0.44
PSEN1-219ENST00000556951 C11orf96Q7Z7L8 435 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 EXOC3L1Q86VI1 746 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 D2HGDHQ8N465 521 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 ARFGAP2Q8N6H7 521 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 STYXQ8WUJ0 223 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 ZNF501Q96CX3 271 aaPredicted RBP12.3□□□□□ -0.44
PSEN1-219ENST00000556951 MTBPQ96DY7 904 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 CPNE1Q99829 537 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 MAGEE1Q9HCI5 957 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 POT1Q9NUX5 634 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 ZFATQ9P243 1243 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 C5AR2Q9P296 337 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 SLC2A6Q9UGQ3 507 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 TCFL5Q9UL49 500 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 TMPRSS11EQ9UL52 423 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 WDR37Q9Y2I8 494 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 SPO11Q9Y5K1 396 aa12.3□□□□□ -0.44
PSEN1-219ENST00000556951 CCDC78A2IDD5 438 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 PRICKLE3O43900 615 aaPredicted RBP12.29□□□□□ -0.44
PSEN1-219ENST00000556951 VAPBO95292 243 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 SNRPAP09012 282 aaKnown RBP12.29□□□□□ -0.44
PSEN1-219ENST00000556951 KRT15P19012 456 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 CAPN3P20807 821 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 RPL10P27635 214 aaKnown RBP12.29□□□□□ -0.44
PSEN1-219ENST00000556951 GP5P40197 560 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 PPP2R2AP63151 447 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 ACY1Q03154 408 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 ACVR1Q04771 509 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 RAPSNQ13702 412 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 SEPT7Q16181 437 aaKnown RBP12.29□□□□□ -0.44
PSEN1-219ENST00000556951 PLA2G4EQ3MJ16 856 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 HSP90AA5PQ58FG0 334 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 NEPROQ6NW34 567 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 CRTC3Q6UUV7 619 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 PACS1Q6VY07 963 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 MED25Q71SY5 747 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 TRABD2AQ86V40 505 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 TRIM48Q8IWZ4 208 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 LMNTD2Q8IXW0 634 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 ENDOVQ8N8Q3 282 aaKnown RBP12.29□□□□□ -0.44
PSEN1-219ENST00000556951 TMEM102Q8N9M5 508 aaPredicted RBP12.29□□□□□ -0.44
PSEN1-219ENST00000556951 GPR26Q8NDV2 337 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 LRFN5Q96NI6 719 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 FAM167BQ9BTA0 163 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 NLNQ9BYT8 704 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 IARS2Q9NSE4 1012 aaKnown RBP12.29□□□□□ -0.44
PSEN1-219ENST00000556951 NLE1Q9NVX2 485 aaPredicted RBP12.29□□□□□ -0.44
PSEN1-219ENST00000556951 GPR83Q9NYM4 423 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 TXNDC16Q9P2K2 825 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 DNAJC16Q9Y2G8 782 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 ARL5AQ9Y689 179 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 SPTBP11277 2137 aa12.29□□□□□ -0.44
PSEN1-219ENST00000556951 MDC1Q14676 2089 aaKnown RBP12.28□□□□□ -0.44
PSEN1-219ENST00000556951 NSD1Q96L73 2696 aaPredicted RBP12.28□□□□□ -0.44
PSEN1-219ENST00000556951 C1orf232A0A0U1RR37 186 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 RGSL1A5PLK6 1076 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 PDZK1P1A8MUH7 402 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 KMOO15229 486 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 UGT1A9O60656 530 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 CPNE3O75131 537 aaKnown RBP12.28□□□□□ -0.44
PSEN1-219ENST00000556951 SCRG1O75711 98 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 SLC25A14O95258 325 aaPredicted RBP12.28□□□□□ -0.44
PSEN1-219ENST00000556951 PIRTP0C851 137 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 ARNTP27540 789 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 HPDP32754 393 aaPredicted RBP12.28□□□□□ -0.44
PSEN1-219ENST00000556951 RORAP35398 523 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 CSE1LP55060 971 aaKnown RBP12.28□□□□□ -0.44
PSEN1-219ENST00000556951 ILF2Q12905 390 aaKnown RBP12.28□□□□□ -0.44
PSEN1-219ENST00000556951 GPR19Q15760 415 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 INSCQ1MX18 579 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 CYB5D1Q6P9G0 228 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 IGFL3Q6UXB1 125 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 TIFABQ6ZNK6 161 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 GLT6D1Q7Z4J2 308 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 STRA8Q7Z7C7 330 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 KMT5CQ86Y97 462 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 CNTN4Q8IWV2 1026 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 RBM12BQ8IXT5 1001 aaKnown RBP12.28□□□□□ -0.44
PSEN1-219ENST00000556951 DSELQ8IZU8 1212 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 TTC30BQ8N4P2 665 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 OR13J1Q8NGT2 312 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 CALML6Q8TD86 181 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 MZB1Q8WU39 189 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 HDAC10Q969S8 669 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 C19orf43Q9BQ61 176 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 TIMM29Q9BSF4 260 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 TRIM8Q9BZR9 551 aa12.28□□□□□ -0.44
PSEN1-219ENST00000556951 CNOT10Q9H9A5 744 aaKnown RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms