RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 CUEDC1Q9NWM3 386 aaPredicted RBP12.72□□□□□ -0.37
TGFB3-204ENST00000556285 PAK5Q9P286 719 aa12.72□□□□□ -0.37
TGFB3-204ENST00000556285 ANAPC5Q9UJX4 755 aa12.72□□□□□ -0.37
TGFB3-204ENST00000556285 SLC39A10Q9ULF5 831 aa12.72□□□□□ -0.37
TGFB3-204ENST00000556285 TTC7AQ9ULT0 858 aaPredicted RBP12.72□□□□□ -0.37
TGFB3-204ENST00000556285 PCDHGA10Q9Y5H3 936 aa12.72□□□□□ -0.37
TGFB3-204ENST00000556285 MYO9AB2RTY4 2548 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 CNTRLQ7Z7A1 2325 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 A0A1W2PPV9 198 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 GOLGA8KD6RF30 607 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 F8W8V4 182 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 GOLGA8TH3BQL2 631 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 IGHEP01854 428 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 RPN2P04844 631 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 CD63P08962 238 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 TTPAP49638 278 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 ARSFP54793 590 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 EIF3BP55884 814 aaKnown RBP12.71□□□□□ -0.37
TGFB3-204ENST00000556285 Q0VFX4 171 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 AIMP2Q13155 320 aaKnown RBP12.71□□□□□ -0.37
TGFB3-204ENST00000556285 TMED2Q15363 201 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 WASHC2DQ5SRD0 308 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 PRAMEF13Q5VWM6 474 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 CNSTQ6PJW8 725 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 RNF10Q8N5U6 811 aaKnown RBP12.71□□□□□ -0.37
TGFB3-204ENST00000556285 AMER2Q8N7J2 671 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 CCDC89Q8N998 374 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 OR2A1Q8NGT9 310 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 SKA2Q8WVK7 121 aaPredicted RBP12.71□□□□□ -0.37
TGFB3-204ENST00000556285 PEX13Q92968 403 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 SLC22A18Q96BI1 424 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 BARD1Q99728 777 aaKnown RBP12.71□□□□□ -0.37
TGFB3-204ENST00000556285 SLC26A1Q9H2B4 701 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 SYNPO2LQ9H987 977 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 GALPQ9UBC7 116 aa12.71□□□□□ -0.37
TGFB3-204ENST00000556285 COPG1Q9Y678 874 aaKnown RBP12.71□□□□□ -0.37
TGFB3-204ENST00000556285 DIDO1Q9BTC0 2240 aaKnown RBP12.7□□□□□ -0.38
TGFB3-204ENST00000556285 A0A0J9YVX5 310 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 TCRBV7S3A2A0A539 114 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 FITM1A5D6W6 292 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 ANKUB1A6NFN9 424 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 VSTM2BA6NLU5 285 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 NIPSNAP2O75323 286 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 NDUFS3O75489 264 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 VAPBO95292 243 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 ALBP02768 609 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 F7P08709 466 aaPredicted RBP12.7□□□□□ -0.38
TGFB3-204ENST00000556285 MGAT1P26572 445 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 VARSP26640 1264 aaKnown RBP12.7□□□□□ -0.38
TGFB3-204ENST00000556285 PPARGP37231 505 aaPredicted RBP12.7□□□□□ -0.38
TGFB3-204ENST00000556285 KCNJ1P48048 391 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 TERF1P54274 439 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 GRM7Q14831 915 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 ZC3H12BQ5HYM0 836 aaKnown RBP12.7□□□□□ -0.38
TGFB3-204ENST00000556285 AARS2Q5JTZ9 985 aaKnown RBP12.7□□□□□ -0.38
TGFB3-204ENST00000556285 MEI1Q5TIA1 1274 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 MAMDC2Q7Z304 686 aaPredicted RBP12.7□□□□□ -0.38
TGFB3-204ENST00000556285 PRSS58Q8IYP2 241 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 OR2L3Q8NG85 312 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 RAD51AP1Q96B01 352 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 MFSD3Q96ES6 412 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 BIRC8Q96P09 236 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 TRIM56Q9BRZ2 755 aaKnown RBP12.7□□□□□ -0.38
TGFB3-204ENST00000556285 WDR54Q9H977 334 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 INTS7Q9NVH2 962 aaKnown RBP12.7□□□□□ -0.38
TGFB3-204ENST00000556285 SYBUQ9NX95 663 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 GNPTGQ9UJJ9 305 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 CPAMD8Q8IZJ3 1885 aa12.7□□□□□ -0.38
TGFB3-204ENST00000556285 SVILO95425 2214 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 HYKKA2RU49 373 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 TARM1B6A8C7 271 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 FFAR3O14843 346 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 GPR42O15529 346 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 IPO13O94829 963 aaKnown RBP12.69□□□□□ -0.38
TGFB3-204ENST00000556285 DDAH2O95865 285 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 EIF2S1P05198 315 aaKnown RBP12.69□□□□□ -0.38
TGFB3-204ENST00000556285 RPS3P23396 243 aaKnown RBP eCLIP12.69□□□□□ -0.38
TGFB3-204ENST00000556285 FMO4P31512 558 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 BASP1P80723 227 aaKnown RBP12.69□□□□□ -0.38
TGFB3-204ENST00000556285 CCNG2Q16589 344 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.69□□□□□ -0.38
TGFB3-204ENST00000556285 TCTE1Q5JU00 501 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 FBXO42Q6P3S6 717 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 TTC23LQ6PF05 361 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 OTOAQ7RTW8 1153 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 TXLNBQ8N3L3 684 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 TTC29Q8NA56 475 aaPredicted RBP12.69□□□□□ -0.38
TGFB3-204ENST00000556285 OR11G2Q8NGC1 345 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 UBE2Q2Q8WVN8 375 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 LPGAT1Q92604 370 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 ZUFSPQ96AP4 578 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 C8orf44Q96CB5 159 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 PANX3Q96QZ0 392 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 WDR77Q9BQA1 342 aaPredicted RBP12.69□□□□□ -0.38
TGFB3-204ENST00000556285 ACAT2Q9BWD1 397 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 EIF2B3Q9NR50 452 aaKnown RBP12.69□□□□□ -0.38
TGFB3-204ENST00000556285 ENAMQ9NRM1 1142 aa12.69□□□□□ -0.38
TGFB3-204ENST00000556285 ZC3H7BQ9UGR2 993 aaKnown RBP12.69□□□□□ -0.38
TGFB3-204ENST00000556285 NOVA2Q9UNW9 492 aaKnown RBP12.69□□□□□ -0.38
TGFB3-204ENST00000556285 POLEQ07864 2286 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms