RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 ITGAMP11215 1152 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 ITIH1P19827 911 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 CYP2A7P20853 494 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 RYKP34925 604 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 PIGAP37287 484 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 KIR3DL1P43629 444 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 IL5RAQ01344 420 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 CD47Q08722 323 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 ABRQ12979 859 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 SPIDRQ14159 915 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 NR1D2Q14995 579 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 RGS21Q2M5E4 152 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 DPY19L1Q2PZI1 675 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 ZDHHC20Q5W0Z9 365 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 CES5AQ6NT32 575 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 GALNT18Q6P9A2 607 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 SHQ1Q6PI26 577 aaKnown RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 MBOAT1Q6ZNC8 495 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 HORMAD1Q86X24 394 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 ZDHHC21Q8IVQ6 265 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 HS3ST5Q8IZT8 346 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 BEND7Q8N7W2 519 aaPredicted RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 NETO1Q8TDF5 533 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 TRUB1Q8WWH5 349 aaKnown RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 MUL1Q969V5 352 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 TSSK3Q96PN8 268 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 APOL4Q9BPW4 351 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 BCL7BQ9BQE9 202 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 ASPSCR1Q9BZE9 553 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 SAGE1Q9NXZ1 904 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 SCN3BQ9NY72 215 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 LMCD1Q9NZU5 365 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 KIF17Q9P2E2 1029 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 DNMT3BQ9UBC3 853 aaKnown RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 RPS6KA6Q9UK32 745 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 B3GNT3Q9Y2A9 372 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 DLGAP4Q9Y2H0 992 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 TPRKBQ9Y3C4 175 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 U3KQV3 271 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 A8MX80 341 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 ZNF99A8MXY4 864 aaPredicted RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 MYO1GB0I1T2 1018 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 EPN2O95208 641 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 ANGPTL1O95841 491 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 GSNP06396 782 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 INHBBP09529 407 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 MYCLP1P12525 358 aaPredicted RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 ACPPP15309 386 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 PRPS1L1P21108 318 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 PRPH2P23942 346 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 GGT5P36269 586 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 SERPINB10P48595 397 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 TRPC1P48995 793 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 BMXP51813 675 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 HNRNPFP52597 415 aaKnown RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 SNRPD1P62314 119 aaKnown RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 IL1RL1Q01638 556 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 SP140Q13342 867 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 GTF2H3Q13889 308 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 BOP1Q14137 746 aaKnown RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 CTU2Q2VPK5 515 aaKnown RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 GTDC1Q4AE62 458 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 SPOUT1Q5T280 376 aaKnown RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 GTF2IRD2BQ6EKJ0 949 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 OR2T5Q6IEZ7 315 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 DUS1LQ6P1R4 473 aaKnown RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 ERICH5Q6P6B1 374 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 DOK6Q6PKX4 331 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 TPRG1Q6ZUI0 275 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 DNAJB7Q7Z6W7 309 aaPredicted RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 SERPINA11Q86U17 422 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 GTF2IRD2Q86UP8 949 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 ANKRD46Q86W74 232 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 DCP2Q8IU60 420 aaKnown RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 ADGRG2Q8IZP9 1017 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 APCDD1Q8J025 514 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 PIK3C3Q8NEB9 887 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 OR2AP1Q8NGE2 309 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 OR2T29Q8NH02 315 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 WFDC5Q8TCV5 224 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 STARD8Q92502 1023 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 RORBQ92753 470 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 ZNF566Q969W8 418 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 ALG14Q96F25 216 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 IGSF21Q96ID5 467 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 LYSMD1Q96S90 227 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 CLSTN3Q9BQT9 956 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 FUNDC2Q9BWH2 189 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 GABARAPL1Q9H0R8 117 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 TNKS2Q9H2K2 1166 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 TRIT1Q9H3H1 467 aaKnown RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 RIBC2Q9H4K1 309 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 TM9SF3Q9HD45 589 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 PRM3Q9NNZ6 103 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 HMG20AQ9NP66 347 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 SERHLQ9NQF3 203 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 DNAJC11Q9NVH1 559 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 KIAA1522Q9P206 1035 aaPredicted RBP6.81□□□□□ -1.32
TDP1-213ENST00000555880 ENPP5Q9UJA9 477 aa6.81□□□□□ -1.32
TDP1-213ENST00000555880 UTS2RQ9UKP6 389 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms